Protein–RNA interactions for Protein: P0C7T8

TMEM253, Transmembrane protein 253, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253P0C7T8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TMEM253P0C7T8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.74■■□□□ 1.39
TMEM253P0C7T8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.74■■□□□ 1.39
TMEM253P0C7T8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
TMEM253P0C7T8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
TMEM253P0C7T8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TMEM253P0C7T8 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TMEM253P0C7T8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.73■■□□□ 1.39
TMEM253P0C7T8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TMEM253P0C7T8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.73■■□□□ 1.39
TMEM253P0C7T8 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.73■■□□□ 1.39
TMEM253P0C7T8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.73■■□□□ 1.39
TMEM253P0C7T8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
TMEM253P0C7T8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TMEM253P0C7T8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.72■■□□□ 1.39
TMEM253P0C7T8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TMEM253P0C7T8 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
TMEM253P0C7T8 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TMEM253P0C7T8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.72■■□□□ 1.39
TMEM253P0C7T8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.72■■□□□ 1.39
TMEM253P0C7T8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TMEM253P0C7T8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
TMEM253P0C7T8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.72■■□□□ 1.39
TMEM253P0C7T8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TMEM253P0C7T8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
TMEM253P0C7T8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TMEM253P0C7T8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.72■■□□□ 1.39
TMEM253P0C7T8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.72■■□□□ 1.39
TMEM253P0C7T8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TMEM253P0C7T8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
TMEM253P0C7T8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.71■■□□□ 1.39
TMEM253P0C7T8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.71■■□□□ 1.39
TMEM253P0C7T8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TMEM253P0C7T8 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TMEM253P0C7T8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.71■■□□□ 1.39
TMEM253P0C7T8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.71■■□□□ 1.39
TMEM253P0C7T8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TMEM253P0C7T8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
TMEM253P0C7T8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
TMEM253P0C7T8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.71■■□□□ 1.39
TMEM253P0C7T8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.7■■□□□ 1.39
TMEM253P0C7T8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
TMEM253P0C7T8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
TMEM253P0C7T8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.7■■□□□ 1.38
TMEM253P0C7T8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TMEM253P0C7T8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.7■■□□□ 1.38
TMEM253P0C7T8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TMEM253P0C7T8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TMEM253P0C7T8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
TMEM253P0C7T8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
TMEM253P0C7T8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
TMEM253P0C7T8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
TMEM253P0C7T8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TMEM253P0C7T8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
TMEM253P0C7T8 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TMEM253P0C7T8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.69■■□□□ 1.38
TMEM253P0C7T8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
TMEM253P0C7T8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.69■■□□□ 1.38
TMEM253P0C7T8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.69■■□□□ 1.38
TMEM253P0C7T8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.69■■□□□ 1.38
TMEM253P0C7T8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
TMEM253P0C7T8 AC144652.1-201ENST00000609974 1624 ntBASIC23.69■■□□□ 1.38
TMEM253P0C7T8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TMEM253P0C7T8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
TMEM253P0C7T8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TMEM253P0C7T8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
TMEM253P0C7T8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TMEM253P0C7T8 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TMEM253P0C7T8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.68■■□□□ 1.38
TMEM253P0C7T8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
TMEM253P0C7T8 AL031848.2-201ENST00000607670 837 ntBASIC23.68■■□□□ 1.38
TMEM253P0C7T8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.68■■□□□ 1.38
TMEM253P0C7T8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.68■■□□□ 1.38
TMEM253P0C7T8 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TMEM253P0C7T8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.68■■□□□ 1.38
TMEM253P0C7T8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.68■■□□□ 1.38
TMEM253P0C7T8 AC127496.7-201ENST00000625110 1798 ntBASIC23.68■■□□□ 1.38
TMEM253P0C7T8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
TMEM253P0C7T8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TMEM253P0C7T8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TMEM253P0C7T8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
TMEM253P0C7T8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.67■■□□□ 1.38
TMEM253P0C7T8 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TMEM253P0C7T8 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
TMEM253P0C7T8 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TMEM253P0C7T8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.67■■□□□ 1.38
TMEM253P0C7T8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TMEM253P0C7T8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TMEM253P0C7T8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TMEM253P0C7T8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TMEM253P0C7T8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TMEM253P0C7T8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TMEM253P0C7T8 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TMEM253P0C7T8 AC242852.2-201ENST00000615738 1807 ntBASIC23.66■■□□□ 1.38
TMEM253P0C7T8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TMEM253P0C7T8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TMEM253P0C7T8 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TMEM253P0C7T8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
TMEM253P0C7T8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TMEM253P0C7T8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms