Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
COL5A2P05997 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
COL5A2P05997 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC30.04■■■□□ 2.4
COL5A2P05997 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
COL5A2P05997 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC30.04■■■□□ 2.4
COL5A2P05997 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC30.04■■■□□ 2.4
COL5A2P05997 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
COL5A2P05997 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
COL5A2P05997 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC30.04■■■□□ 2.4
COL5A2P05997 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
COL5A2P05997 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
COL5A2P05997 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC30.03■■■□□ 2.4
COL5A2P05997 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
COL5A2P05997 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC30.03■■■□□ 2.4
COL5A2P05997 TK2-208ENST00000545043 1120 ntTSL 2 BASIC30.03■■■□□ 2.4
COL5A2P05997 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
COL5A2P05997 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC30.03■■■□□ 2.4
COL5A2P05997 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC30.02■■■□□ 2.4
COL5A2P05997 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
COL5A2P05997 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
COL5A2P05997 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
COL5A2P05997 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC30.02■■■□□ 2.4
COL5A2P05997 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
COL5A2P05997 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
COL5A2P05997 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
COL5A2P05997 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
COL5A2P05997 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC30.01■■■□□ 2.4
COL5A2P05997 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC30.01■■■□□ 2.39
COL5A2P05997 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
COL5A2P05997 AC091060.1-201ENST00000623524 1766 ntBASIC30.01■■■□□ 2.39
COL5A2P05997 AL121749.1-202ENST00000609313 2153 ntBASIC30.01■■■□□ 2.39
COL5A2P05997 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
COL5A2P05997 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC30■■■□□ 2.39
COL5A2P05997 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
COL5A2P05997 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC30■■■□□ 2.39
COL5A2P05997 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
COL5A2P05997 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC30■■■□□ 2.39
COL5A2P05997 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC29.99■■■□□ 2.39
COL5A2P05997 MPST-204ENST00000404393 1329 ntTSL 5 BASIC29.99■■■□□ 2.39
COL5A2P05997 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC29.99■■■□□ 2.39
COL5A2P05997 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC29.99■■■□□ 2.39
COL5A2P05997 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
COL5A2P05997 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
COL5A2P05997 AC080038.1-201ENST00000611274 1154 ntBASIC29.99■■■□□ 2.39
COL5A2P05997 AC073111.5-205ENST00000641717 521 ntBASIC29.99■■■□□ 2.39
COL5A2P05997 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
COL5A2P05997 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC29.98■■■□□ 2.39
COL5A2P05997 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
COL5A2P05997 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
COL5A2P05997 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
COL5A2P05997 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC29.98■■■□□ 2.39
COL5A2P05997 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
COL5A2P05997 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC29.98■■■□□ 2.39
COL5A2P05997 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC29.98■■■□□ 2.39
COL5A2P05997 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC29.98■■■□□ 2.39
COL5A2P05997 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC29.97■■■□□ 2.39
COL5A2P05997 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
COL5A2P05997 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC29.97■■■□□ 2.39
COL5A2P05997 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC29.97■■■□□ 2.39
COL5A2P05997 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
COL5A2P05997 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
COL5A2P05997 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC29.97■■■□□ 2.39
COL5A2P05997 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC29.97■■■□□ 2.39
COL5A2P05997 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
COL5A2P05997 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
COL5A2P05997 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
COL5A2P05997 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
COL5A2P05997 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
COL5A2P05997 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC29.96■■■□□ 2.39
COL5A2P05997 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
COL5A2P05997 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
COL5A2P05997 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
COL5A2P05997 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
COL5A2P05997 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
COL5A2P05997 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
COL5A2P05997 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
COL5A2P05997 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC29.95■■■□□ 2.39
COL5A2P05997 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.39
COL5A2P05997 CDCA4P2-201ENST00000441182 718 ntBASIC29.95■■■□□ 2.39
COL5A2P05997 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC29.95■■■□□ 2.39
COL5A2P05997 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC29.95■■■□□ 2.38
COL5A2P05997 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC29.94■■■□□ 2.38
COL5A2P05997 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
COL5A2P05997 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC29.94■■■□□ 2.38
COL5A2P05997 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
COL5A2P05997 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC29.94■■■□□ 2.38
COL5A2P05997 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC29.94■■■□□ 2.38
COL5A2P05997 EMC9-206ENST00000560403 872 ntTSL 2 BASIC29.94■■■□□ 2.38
COL5A2P05997 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC29.94■■■□□ 2.38
COL5A2P05997 TPRG1LP1-201ENST00000598702 760 ntBASIC29.94■■■□□ 2.38
COL5A2P05997 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
COL5A2P05997 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
COL5A2P05997 AP005435.1-201ENST00000529293 1178 ntBASIC29.93■■■□□ 2.38
COL5A2P05997 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC29.93■■■□□ 2.38
COL5A2P05997 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
COL5A2P05997 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
COL5A2P05997 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC29.93■■■□□ 2.38
COL5A2P05997 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC29.93■■■□□ 2.38
COL5A2P05997 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
COL5A2P05997 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms