Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.07■□□□□ 0.8
HLA-DPB1P04440 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DPB1P04440 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.07■□□□□ 0.8
HLA-DPB1P04440 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DPB1P04440 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
HLA-DPB1P04440 AC242852.2-201ENST00000615738 1807 ntBASIC20.06■□□□□ 0.8
HLA-DPB1P04440 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DPB1P04440 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DPB1P04440 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DPB1P04440 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.06■□□□□ 0.8
HLA-DPB1P04440 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DPB1P04440 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
HLA-DPB1P04440 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.06■□□□□ 0.8
HLA-DPB1P04440 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DPB1P04440 AC074183.2-201ENST00000623112 922 ntBASIC20.06■□□□□ 0.8
HLA-DPB1P04440 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.06■□□□□ 0.8
HLA-DPB1P04440 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DPB1P04440 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DPB1P04440 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DPB1P04440 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DPB1P04440 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
HLA-DPB1P04440 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DPB1P04440 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DPB1P04440 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
HLA-DPB1P04440 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DPB1P04440 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.05■□□□□ 0.8
HLA-DPB1P04440 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DPB1P04440 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
HLA-DPB1P04440 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DPB1P04440 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.05■□□□□ 0.8
HLA-DPB1P04440 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DPB1P04440 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.04■□□□□ 0.8
HLA-DPB1P04440 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DPB1P04440 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DPB1P04440 ESRRAP2-201ENST00000418437 1549 ntBASIC20.04■□□□□ 0.8
HLA-DPB1P04440 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DPB1P04440 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.04■□□□□ 0.8
HLA-DPB1P04440 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DPB1P04440 AL592295.1-201ENST00000400984 884 ntBASIC20.04■□□□□ 0.8
HLA-DPB1P04440 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.04■□□□□ 0.8
HLA-DPB1P04440 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DPB1P04440 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.04■□□□□ 0.8
HLA-DPB1P04440 AC019171.1-201ENST00000601251 1056 ntBASIC20.04■□□□□ 0.8
HLA-DPB1P04440 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DPB1P04440 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DPB1P04440 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
HLA-DPB1P04440 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.04■□□□□ 0.8
HLA-DPB1P04440 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
HLA-DPB1P04440 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
HLA-DPB1P04440 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DPB1P04440 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.03■□□□□ 0.8
HLA-DPB1P04440 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DPB1P04440 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DPB1P04440 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DPB1P04440 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.03■□□□□ 0.8
HLA-DPB1P04440 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.03■□□□□ 0.8
HLA-DPB1P04440 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.03■□□□□ 0.8
HLA-DPB1P04440 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.03■□□□□ 0.8
HLA-DPB1P04440 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DPB1P04440 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DPB1P04440 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.03■□□□□ 0.8
HLA-DPB1P04440 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.03■□□□□ 0.8
HLA-DPB1P04440 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
HLA-DPB1P04440 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
HLA-DPB1P04440 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
HLA-DPB1P04440 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DPB1P04440 KRT8P33-201ENST00000508125 1423 ntBASIC20.02■□□□□ 0.8
HLA-DPB1P04440 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DPB1P04440 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DPB1P04440 AC007375.3-201ENST00000600936 2314 ntBASIC20.02■□□□□ 0.8
HLA-DPB1P04440 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DPB1P04440 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DPB1P04440 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DPB1P04440 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
HLA-DPB1P04440 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.02■□□□□ 0.79
HLA-DPB1P04440 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HLA-DPB1P04440 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.02■□□□□ 0.79
HLA-DPB1P04440 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DPB1P04440 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DPB1P04440 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DPB1P04440 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HLA-DPB1P04440 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.01■□□□□ 0.79
HLA-DPB1P04440 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
HLA-DPB1P04440 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
HLA-DPB1P04440 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.01■□□□□ 0.79
HLA-DPB1P04440 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DPB1P04440 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DPB1P04440 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
HLA-DPB1P04440 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.01■□□□□ 0.79
HLA-DPB1P04440 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DPB1P04440 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DPB1P04440 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20■□□□□ 0.79
HLA-DPB1P04440 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DPB1P04440 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20■□□□□ 0.79
HLA-DPB1P04440 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HLA-DPB1P04440 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DPB1P04440 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-DPB1P04440 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
HLA-DPB1P04440 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
HLA-DPB1P04440 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms