Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
MT-ND1P03886 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MT-ND1P03886 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
MT-ND1P03886 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
MT-ND1P03886 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.07■□□□□ 0.96
MT-ND1P03886 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.07■□□□□ 0.96
MT-ND1P03886 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
MT-ND1P03886 AL592295.1-201ENST00000400984 884 ntBASIC21.07■□□□□ 0.96
MT-ND1P03886 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.07■□□□□ 0.96
MT-ND1P03886 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.07■□□□□ 0.96
MT-ND1P03886 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.07■□□□□ 0.96
MT-ND1P03886 PKD1P6-201ENST00000343738 4769 ntBASIC21.07■□□□□ 0.96
MT-ND1P03886 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.07■□□□□ 0.96
MT-ND1P03886 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.07■□□□□ 0.96
MT-ND1P03886 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MT-ND1P03886 AL024507.2-201ENST00000606070 2574 ntBASIC21.06■□□□□ 0.96
MT-ND1P03886 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
MT-ND1P03886 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.06■□□□□ 0.96
MT-ND1P03886 AC129492.7-201ENST00000622992 756 ntBASIC21.06■□□□□ 0.96
MT-ND1P03886 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MT-ND1P03886 AL022069.1-201ENST00000568025 1636 ntBASIC21.06■□□□□ 0.96
MT-ND1P03886 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
MT-ND1P03886 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MT-ND1P03886 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MT-ND1P03886 AC242852.2-201ENST00000615738 1807 ntBASIC21.06■□□□□ 0.96
MT-ND1P03886 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MT-ND1P03886 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.05■□□□□ 0.96
MT-ND1P03886 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
MT-ND1P03886 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MT-ND1P03886 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.05■□□□□ 0.96
MT-ND1P03886 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
MT-ND1P03886 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MT-ND1P03886 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MT-ND1P03886 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.05■□□□□ 0.96
MT-ND1P03886 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.05■□□□□ 0.96
MT-ND1P03886 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MT-ND1P03886 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MT-ND1P03886 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MT-ND1P03886 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MT-ND1P03886 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
MT-ND1P03886 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MT-ND1P03886 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MT-ND1P03886 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.04■□□□□ 0.96
MT-ND1P03886 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.04■□□□□ 0.96
MT-ND1P03886 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.04■□□□□ 0.96
MT-ND1P03886 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
MT-ND1P03886 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MT-ND1P03886 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MT-ND1P03886 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MT-ND1P03886 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MT-ND1P03886 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.03■□□□□ 0.96
MT-ND1P03886 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MT-ND1P03886 KRT18P60-201ENST00000312876 1297 ntBASIC21.03■□□□□ 0.96
MT-ND1P03886 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MT-ND1P03886 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MT-ND1P03886 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MT-ND1P03886 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
MT-ND1P03886 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MT-ND1P03886 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MT-ND1P03886 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MT-ND1P03886 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MT-ND1P03886 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MT-ND1P03886 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MT-ND1P03886 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MT-ND1P03886 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.02■□□□□ 0.96
MT-ND1P03886 LONRF2P2-201ENST00000439212 571 ntBASIC21.02■□□□□ 0.96
MT-ND1P03886 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.02■□□□□ 0.96
MT-ND1P03886 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.02■□□□□ 0.96
MT-ND1P03886 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MT-ND1P03886 ALDH1A3-203ENST00000557963 1670 ntBASIC21.02■□□□□ 0.95
MT-ND1P03886 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
MT-ND1P03886 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
MT-ND1P03886 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
MT-ND1P03886 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MT-ND1P03886 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.01■□□□□ 0.95
MT-ND1P03886 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.01■□□□□ 0.95
MT-ND1P03886 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
MT-ND1P03886 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MT-ND1P03886 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.01■□□□□ 0.95
MT-ND1P03886 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
MT-ND1P03886 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MT-ND1P03886 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MT-ND1P03886 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MT-ND1P03886 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.01■□□□□ 0.95
MT-ND1P03886 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MT-ND1P03886 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MT-ND1P03886 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21■□□□□ 0.95
MT-ND1P03886 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
MT-ND1P03886 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MT-ND1P03886 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MT-ND1P03886 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MT-ND1P03886 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21■□□□□ 0.95
MT-ND1P03886 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21■□□□□ 0.95
MT-ND1P03886 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21■□□□□ 0.95
MT-ND1P03886 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MT-ND1P03886 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
MT-ND1P03886 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
MT-ND1P03886 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
MT-ND1P03886 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.99■□□□□ 0.95
MT-ND1P03886 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms