Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 FP325331.1-202ENST00000623531 1380 ntBASIC24.6■■□□□ 1.53
CHRNA1P02708 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHRNA1P02708 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHRNA1P02708 NME4-202ENST00000382940 766 ntTSL 3 BASIC24.6■■□□□ 1.53
CHRNA1P02708 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
CHRNA1P02708 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CHRNA1P02708 NME4-211ENST00000620944 1193 ntTSL 2 BASIC24.6■■□□□ 1.53
CHRNA1P02708 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CHRNA1P02708 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CHRNA1P02708 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.59■■□□□ 1.53
CHRNA1P02708 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
CHRNA1P02708 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CHRNA1P02708 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.59■■□□□ 1.53
CHRNA1P02708 MIR572-201ENST00000384983 95 ntBASIC24.59■■□□□ 1.53
CHRNA1P02708 DUX4L4-201ENST00000566884 1269 ntBASIC24.59■■□□□ 1.53
CHRNA1P02708 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.59■■□□□ 1.53
CHRNA1P02708 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CHRNA1P02708 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.59■■□□□ 1.53
CHRNA1P02708 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CHRNA1P02708 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CHRNA1P02708 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CHRNA1P02708 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
CHRNA1P02708 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
CHRNA1P02708 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CHRNA1P02708 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
CHRNA1P02708 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CHRNA1P02708 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.53
CHRNA1P02708 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHRNA1P02708 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHRNA1P02708 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.58■■□□□ 1.53
CHRNA1P02708 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.58■■□□□ 1.53
CHRNA1P02708 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.58■■□□□ 1.53
CHRNA1P02708 AL358852.1-201ENST00000623174 1268 ntBASIC24.58■■□□□ 1.53
CHRNA1P02708 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CHRNA1P02708 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CHRNA1P02708 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.52
CHRNA1P02708 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CHRNA1P02708 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.57■■□□□ 1.52
CHRNA1P02708 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CHRNA1P02708 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CHRNA1P02708 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CHRNA1P02708 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
CHRNA1P02708 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
CHRNA1P02708 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CHRNA1P02708 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
CHRNA1P02708 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC24.57■■□□□ 1.52
CHRNA1P02708 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
CHRNA1P02708 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
CHRNA1P02708 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CHRNA1P02708 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.56■■□□□ 1.52
CHRNA1P02708 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.56■■□□□ 1.52
CHRNA1P02708 AC027612.3-201ENST00000413684 1047 ntBASIC24.56■■□□□ 1.52
CHRNA1P02708 DUX4L2-201ENST00000561772 1275 ntBASIC24.56■■□□□ 1.52
CHRNA1P02708 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.56■■□□□ 1.52
CHRNA1P02708 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.56■■□□□ 1.52
CHRNA1P02708 MIR6084-201ENST00000622012 110 ntBASIC24.56■■□□□ 1.52
CHRNA1P02708 DUX4L6-201ENST00000626483 1275 ntBASIC24.56■■□□□ 1.52
CHRNA1P02708 DUX4L1-201ENST00000627662 1275 ntBASIC24.56■■□□□ 1.52
CHRNA1P02708 DUX4L8-201ENST00000629013 1275 ntBASIC24.56■■□□□ 1.52
CHRNA1P02708 DUX4L3-201ENST00000630187 1275 ntBASIC24.56■■□□□ 1.52
CHRNA1P02708 DUX4L7-201ENST00000630678 1275 ntBASIC24.56■■□□□ 1.52
CHRNA1P02708 DUX4L5-201ENST00000630834 1275 ntBASIC24.56■■□□□ 1.52
CHRNA1P02708 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CHRNA1P02708 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.56■■□□□ 1.52
CHRNA1P02708 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CHRNA1P02708 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CHRNA1P02708 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CHRNA1P02708 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC24.56■■□□□ 1.52
CHRNA1P02708 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.55■■□□□ 1.52
CHRNA1P02708 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CHRNA1P02708 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.55■■□□□ 1.52
CHRNA1P02708 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.55■■□□□ 1.52
CHRNA1P02708 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
CHRNA1P02708 KRT18P5-201ENST00000436075 1291 ntBASIC24.55■■□□□ 1.52
CHRNA1P02708 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CHRNA1P02708 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.55■■□□□ 1.52
CHRNA1P02708 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CHRNA1P02708 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC24.55■■□□□ 1.52
CHRNA1P02708 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CHRNA1P02708 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24.54■■□□□ 1.52
CHRNA1P02708 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CHRNA1P02708 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CHRNA1P02708 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.54■■□□□ 1.52
CHRNA1P02708 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
CHRNA1P02708 OR2I1P-207ENST00000453522 948 ntBASIC24.54■■□□□ 1.52
CHRNA1P02708 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.54■■□□□ 1.52
CHRNA1P02708 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CHRNA1P02708 AC022517.1-201ENST00000592429 346 ntBASIC24.54■■□□□ 1.52
CHRNA1P02708 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.54■■□□□ 1.52
CHRNA1P02708 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CHRNA1P02708 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
CHRNA1P02708 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHRNA1P02708 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.53■■□□□ 1.52
CHRNA1P02708 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
CHRNA1P02708 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
CHRNA1P02708 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHRNA1P02708 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHRNA1P02708 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHRNA1P02708 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC24.53■■□□□ 1.52
CHRNA1P02708 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms