Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
APOC1P02654 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
APOC1P02654 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
APOC1P02654 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
APOC1P02654 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
APOC1P02654 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
APOC1P02654 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
APOC1P02654 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.69■□□□□ 0.74
APOC1P02654 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
APOC1P02654 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
APOC1P02654 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APOC1P02654 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APOC1P02654 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.68■□□□□ 0.74
APOC1P02654 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
APOC1P02654 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APOC1P02654 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
APOC1P02654 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.68■□□□□ 0.74
APOC1P02654 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.68■□□□□ 0.74
APOC1P02654 SNX5-217ENST00000606557 1087 ntBASIC19.68■□□□□ 0.74
APOC1P02654 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.68■□□□□ 0.74
APOC1P02654 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APOC1P02654 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
APOC1P02654 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.68■□□□□ 0.74
APOC1P02654 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.68■□□□□ 0.74
APOC1P02654 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
APOC1P02654 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APOC1P02654 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOC1P02654 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
APOC1P02654 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.67■□□□□ 0.74
APOC1P02654 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOC1P02654 BX664725.1-201ENST00000438252 379 ntBASIC19.67■□□□□ 0.74
APOC1P02654 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOC1P02654 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOC1P02654 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOC1P02654 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOC1P02654 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
APOC1P02654 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOC1P02654 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOC1P02654 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOC1P02654 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.66■□□□□ 0.74
APOC1P02654 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
APOC1P02654 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.66■□□□□ 0.74
APOC1P02654 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOC1P02654 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOC1P02654 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOC1P02654 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
APOC1P02654 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
APOC1P02654 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
APOC1P02654 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.65■□□□□ 0.74
APOC1P02654 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
APOC1P02654 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.65■□□□□ 0.74
APOC1P02654 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
APOC1P02654 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.65■□□□□ 0.74
APOC1P02654 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
APOC1P02654 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
APOC1P02654 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.65■□□□□ 0.74
APOC1P02654 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
APOC1P02654 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
APOC1P02654 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
APOC1P02654 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
APOC1P02654 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.64■□□□□ 0.74
APOC1P02654 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
APOC1P02654 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.64■□□□□ 0.74
APOC1P02654 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
APOC1P02654 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
APOC1P02654 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
APOC1P02654 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
APOC1P02654 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.64■□□□□ 0.73
APOC1P02654 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
APOC1P02654 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
APOC1P02654 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
APOC1P02654 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.63■□□□□ 0.73
APOC1P02654 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
APOC1P02654 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
APOC1P02654 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.63■□□□□ 0.73
APOC1P02654 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.63■□□□□ 0.73
APOC1P02654 MIR6722-201ENST00000617286 78 ntBASIC19.63■□□□□ 0.73
APOC1P02654 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.63■□□□□ 0.73
APOC1P02654 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
APOC1P02654 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APOC1P02654 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APOC1P02654 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
APOC1P02654 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
APOC1P02654 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
APOC1P02654 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
APOC1P02654 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
APOC1P02654 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
APOC1P02654 AC021242.3-201ENST00000607598 1377 ntBASIC19.62■□□□□ 0.73
APOC1P02654 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
APOC1P02654 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
APOC1P02654 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
APOC1P02654 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.62■□□□□ 0.73
APOC1P02654 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
APOC1P02654 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
APOC1P02654 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
APOC1P02654 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
APOC1P02654 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.62■□□□□ 0.73
APOC1P02654 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
APOC1P02654 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.61■□□□□ 0.73
APOC1P02654 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms