Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LGI1O95970 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.69■□□□□ 0.9
LGI1O95970 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LGI1O95970 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LGI1O95970 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LGI1O95970 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
LGI1O95970 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
LGI1O95970 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LGI1O95970 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LGI1O95970 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LGI1O95970 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LGI1O95970 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
LGI1O95970 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.68■□□□□ 0.9
LGI1O95970 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LGI1O95970 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LGI1O95970 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.67■□□□□ 0.9
LGI1O95970 AC137630.3-201ENST00000607245 391 ntBASIC20.67■□□□□ 0.9
LGI1O95970 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.67■□□□□ 0.9
LGI1O95970 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.67■□□□□ 0.9
LGI1O95970 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LGI1O95970 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LGI1O95970 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LGI1O95970 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.67■□□□□ 0.9
LGI1O95970 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LGI1O95970 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LGI1O95970 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
LGI1O95970 AL353803.4-201ENST00000565882 1934 ntBASIC20.66■□□□□ 0.9
LGI1O95970 GUSBP5-202ENST00000510805 1989 ntBASIC20.66■□□□□ 0.9
LGI1O95970 EP400NL-214ENST00000641289 2402 ntBASIC20.66■□□□□ 0.9
LGI1O95970 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.66■□□□□ 0.9
LGI1O95970 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.66■□□□□ 0.9
LGI1O95970 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.66■□□□□ 0.9
LGI1O95970 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LGI1O95970 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LGI1O95970 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LGI1O95970 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.65■□□□□ 0.9
LGI1O95970 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LGI1O95970 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.65■□□□□ 0.9
LGI1O95970 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.65■□□□□ 0.9
LGI1O95970 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.65■□□□□ 0.9
LGI1O95970 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LGI1O95970 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LGI1O95970 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.65■□□□□ 0.9
LGI1O95970 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LGI1O95970 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
LGI1O95970 ESRRAP2-201ENST00000418437 1549 ntBASIC20.64■□□□□ 0.9
LGI1O95970 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.64■□□□□ 0.89
LGI1O95970 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
LGI1O95970 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LGI1O95970 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.64■□□□□ 0.89
LGI1O95970 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LGI1O95970 AL031848.2-201ENST00000607670 837 ntBASIC20.64■□□□□ 0.89
LGI1O95970 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LGI1O95970 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LGI1O95970 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
LGI1O95970 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LGI1O95970 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.63■□□□□ 0.89
LGI1O95970 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.63■□□□□ 0.89
LGI1O95970 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LGI1O95970 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.63■□□□□ 0.89
LGI1O95970 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LGI1O95970 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LGI1O95970 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LGI1O95970 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.62■□□□□ 0.89
LGI1O95970 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
LGI1O95970 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LGI1O95970 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LGI1O95970 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.62■□□□□ 0.89
LGI1O95970 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.62■□□□□ 0.89
LGI1O95970 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LGI1O95970 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
LGI1O95970 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.62■□□□□ 0.89
LGI1O95970 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LGI1O95970 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
LGI1O95970 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
LGI1O95970 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LGI1O95970 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.61■□□□□ 0.89
LGI1O95970 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.61■□□□□ 0.89
LGI1O95970 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.61■□□□□ 0.89
LGI1O95970 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LGI1O95970 ECEL1P1-201ENST00000373592 1742 ntBASIC20.61■□□□□ 0.89
LGI1O95970 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
LGI1O95970 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LGI1O95970 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LGI1O95970 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LGI1O95970 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
LGI1O95970 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LGI1O95970 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.6■□□□□ 0.89
LGI1O95970 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
LGI1O95970 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
LGI1O95970 LINC00526-201ENST00000581067 1875 ntBASIC20.6■□□□□ 0.89
LGI1O95970 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LGI1O95970 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.6■□□□□ 0.89
LGI1O95970 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.6■□□□□ 0.89
LGI1O95970 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LGI1O95970 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LGI1O95970 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.6■□□□□ 0.89
LGI1O95970 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LGI1O95970 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
LGI1O95970 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms