Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCAF4O95104 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCAF4O95104 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCAF4O95104 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCAF4O95104 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SCAF4O95104 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SCAF4O95104 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.21■□□□□ 0.51
SCAF4O95104 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCAF4O95104 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SCAF4O95104 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SCAF4O95104 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCAF4O95104 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SCAF4O95104 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCAF4O95104 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SCAF4O95104 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.21■□□□□ 0.51
SCAF4O95104 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SCAF4O95104 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.21■□□□□ 0.51
SCAF4O95104 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCAF4O95104 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
SCAF4O95104 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.21■□□□□ 0.51
SCAF4O95104 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SCAF4O95104 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SCAF4O95104 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.21■□□□□ 0.51
SCAF4O95104 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCAF4O95104 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
SCAF4O95104 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
SCAF4O95104 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.21■□□□□ 0.5
SCAF4O95104 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SCAF4O95104 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCAF4O95104 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCAF4O95104 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCAF4O95104 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCAF4O95104 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCAF4O95104 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCAF4O95104 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.2■□□□□ 0.5
SCAF4O95104 ESRRAP2-201ENST00000418437 1549 ntBASIC18.2■□□□□ 0.5
SCAF4O95104 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCAF4O95104 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SCAF4O95104 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCAF4O95104 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
SCAF4O95104 AC129492.7-201ENST00000622992 756 ntBASIC18.2■□□□□ 0.5
SCAF4O95104 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCAF4O95104 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SCAF4O95104 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SCAF4O95104 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.2■□□□□ 0.5
SCAF4O95104 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SCAF4O95104 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCAF4O95104 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCAF4O95104 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCAF4O95104 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.2■□□□□ 0.5
SCAF4O95104 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.19■□□□□ 0.5
SCAF4O95104 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.19■□□□□ 0.5
SCAF4O95104 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.19■□□□□ 0.5
SCAF4O95104 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SCAF4O95104 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SCAF4O95104 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SCAF4O95104 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
SCAF4O95104 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCAF4O95104 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SCAF4O95104 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCAF4O95104 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCAF4O95104 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCAF4O95104 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.18■□□□□ 0.5
SCAF4O95104 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCAF4O95104 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCAF4O95104 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SCAF4O95104 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCAF4O95104 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SCAF4O95104 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCAF4O95104 DUX4L18-201ENST00000553347 1267 ntBASIC18.18■□□□□ 0.5
SCAF4O95104 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.18■□□□□ 0.5
SCAF4O95104 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SCAF4O95104 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.18■□□□□ 0.5
SCAF4O95104 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SCAF4O95104 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
SCAF4O95104 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCAF4O95104 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCAF4O95104 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCAF4O95104 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCAF4O95104 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCAF4O95104 DUX4L9-201ENST00000449051 1259 ntBASIC18.17■□□□□ 0.5
SCAF4O95104 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.17■□□□□ 0.5
SCAF4O95104 AL033527.3-201ENST00000566366 1196 ntBASIC18.17■□□□□ 0.5
SCAF4O95104 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.17■□□□□ 0.5
SCAF4O95104 AC018755.3-202ENST00000596210 929 ntBASIC18.17■□□□□ 0.5
SCAF4O95104 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.17■□□□□ 0.5
SCAF4O95104 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SCAF4O95104 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SCAF4O95104 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCAF4O95104 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCAF4O95104 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCAF4O95104 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCAF4O95104 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.16■□□□□ 0.5
SCAF4O95104 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SCAF4O95104 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
SCAF4O95104 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SCAF4O95104 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCAF4O95104 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCAF4O95104 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCAF4O95104 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms