Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KDM4BO94953 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.55■□□□□ 0.72
KDM4BO94953 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
KDM4BO94953 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KDM4BO94953 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KDM4BO94953 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KDM4BO94953 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KDM4BO94953 GUSBP5-202ENST00000510805 1989 ntBASIC19.54■□□□□ 0.72
KDM4BO94953 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.54■□□□□ 0.72
KDM4BO94953 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KDM4BO94953 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KDM4BO94953 AC139795.1-202ENST00000500444 432 ntBASIC19.54■□□□□ 0.72
KDM4BO94953 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
KDM4BO94953 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KDM4BO94953 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
KDM4BO94953 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KDM4BO94953 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
KDM4BO94953 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KDM4BO94953 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KDM4BO94953 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KDM4BO94953 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KDM4BO94953 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
KDM4BO94953 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.53■□□□□ 0.72
KDM4BO94953 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
KDM4BO94953 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KDM4BO94953 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KDM4BO94953 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
KDM4BO94953 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KDM4BO94953 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.53■□□□□ 0.72
KDM4BO94953 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
KDM4BO94953 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.53■□□□□ 0.72
KDM4BO94953 AC022616.5-201ENST00000518796 181 ntBASIC19.53■□□□□ 0.72
KDM4BO94953 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KDM4BO94953 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.53■□□□□ 0.72
KDM4BO94953 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
KDM4BO94953 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.53■□□□□ 0.72
KDM4BO94953 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
KDM4BO94953 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
KDM4BO94953 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.53■□□□□ 0.72
KDM4BO94953 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KDM4BO94953 LINC00526-201ENST00000581067 1875 ntBASIC19.52■□□□□ 0.72
KDM4BO94953 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
KDM4BO94953 DUX4L18-201ENST00000553347 1267 ntBASIC19.52■□□□□ 0.72
KDM4BO94953 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KDM4BO94953 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KDM4BO94953 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.51■□□□□ 0.71
KDM4BO94953 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
KDM4BO94953 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KDM4BO94953 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KDM4BO94953 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.51■□□□□ 0.71
KDM4BO94953 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
KDM4BO94953 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
KDM4BO94953 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
KDM4BO94953 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KDM4BO94953 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
KDM4BO94953 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.51■□□□□ 0.71
KDM4BO94953 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
KDM4BO94953 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.51■□□□□ 0.71
KDM4BO94953 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
KDM4BO94953 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KDM4BO94953 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
KDM4BO94953 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.5■□□□□ 0.71
KDM4BO94953 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KDM4BO94953 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
KDM4BO94953 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.5■□□□□ 0.71
KDM4BO94953 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KDM4BO94953 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.5■□□□□ 0.71
KDM4BO94953 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.5■□□□□ 0.71
KDM4BO94953 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KDM4BO94953 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
KDM4BO94953 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KDM4BO94953 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
KDM4BO94953 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
KDM4BO94953 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
KDM4BO94953 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
KDM4BO94953 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KDM4BO94953 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KDM4BO94953 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
KDM4BO94953 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KDM4BO94953 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.49■□□□□ 0.71
KDM4BO94953 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.49■□□□□ 0.71
KDM4BO94953 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.49■□□□□ 0.71
KDM4BO94953 AL022069.1-201ENST00000568025 1636 ntBASIC19.49■□□□□ 0.71
KDM4BO94953 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.49■□□□□ 0.71
KDM4BO94953 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KDM4BO94953 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.49■□□□□ 0.71
KDM4BO94953 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KDM4BO94953 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KDM4BO94953 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
KDM4BO94953 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KDM4BO94953 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KDM4BO94953 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KDM4BO94953 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KDM4BO94953 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
KDM4BO94953 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
KDM4BO94953 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
KDM4BO94953 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
KDM4BO94953 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.48■□□□□ 0.71
KDM4BO94953 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
KDM4BO94953 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms