Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
LRCH4O75427 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
LRCH4O75427 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.4■■□□□ 1.34
LRCH4O75427 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.39■■□□□ 1.34
LRCH4O75427 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.39■■□□□ 1.34
LRCH4O75427 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.39■■□□□ 1.34
LRCH4O75427 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.39■■□□□ 1.34
LRCH4O75427 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.39■■□□□ 1.33
LRCH4O75427 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
LRCH4O75427 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.39■■□□□ 1.33
LRCH4O75427 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.39■■□□□ 1.33
LRCH4O75427 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.39■■□□□ 1.33
LRCH4O75427 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
LRCH4O75427 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
LRCH4O75427 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.39■■□□□ 1.33
LRCH4O75427 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.39■■□□□ 1.33
LRCH4O75427 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
LRCH4O75427 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
LRCH4O75427 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.38■■□□□ 1.33
LRCH4O75427 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
LRCH4O75427 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
LRCH4O75427 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LRCH4O75427 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
LRCH4O75427 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
LRCH4O75427 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
LRCH4O75427 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
LRCH4O75427 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.37■■□□□ 1.33
LRCH4O75427 C1orf229-201ENST00000623686 2258 ntBASIC23.36■■□□□ 1.33
LRCH4O75427 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
LRCH4O75427 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LRCH4O75427 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.36■■□□□ 1.33
LRCH4O75427 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.36■■□□□ 1.33
LRCH4O75427 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.36■■□□□ 1.33
LRCH4O75427 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.36■■□□□ 1.33
LRCH4O75427 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.36■■□□□ 1.33
LRCH4O75427 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
LRCH4O75427 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LRCH4O75427 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
LRCH4O75427 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
LRCH4O75427 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
LRCH4O75427 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
LRCH4O75427 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
LRCH4O75427 AC009102.2-201ENST00000606772 1639 ntBASIC23.35■■□□□ 1.33
LRCH4O75427 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
LRCH4O75427 GUSBP5-201ENST00000418136 578 ntBASIC23.35■■□□□ 1.33
LRCH4O75427 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.35■■□□□ 1.33
LRCH4O75427 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.35■■□□□ 1.33
LRCH4O75427 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
LRCH4O75427 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
LRCH4O75427 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
LRCH4O75427 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
LRCH4O75427 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.34■■□□□ 1.33
LRCH4O75427 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LRCH4O75427 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.34■■□□□ 1.33
LRCH4O75427 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
LRCH4O75427 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LRCH4O75427 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.33■■□□□ 1.33
LRCH4O75427 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
LRCH4O75427 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.33■■□□□ 1.33
LRCH4O75427 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
LRCH4O75427 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
LRCH4O75427 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.33■■□□□ 1.33
LRCH4O75427 MIR6724-1-201ENST00000616420 92 ntBASIC23.33■■□□□ 1.33
LRCH4O75427 MIR6724-2-201ENST00000616483 92 ntBASIC23.33■■□□□ 1.33
LRCH4O75427 MIR6724-4-201ENST00000617390 92 ntBASIC23.33■■□□□ 1.33
LRCH4O75427 MIR6724-3-201ENST00000622482 92 ntBASIC23.33■■□□□ 1.33
LRCH4O75427 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
LRCH4O75427 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
LRCH4O75427 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
LRCH4O75427 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
LRCH4O75427 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
LRCH4O75427 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LRCH4O75427 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
LRCH4O75427 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
LRCH4O75427 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LRCH4O75427 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.32■■□□□ 1.32
LRCH4O75427 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
LRCH4O75427 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.32■■□□□ 1.32
LRCH4O75427 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
LRCH4O75427 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
LRCH4O75427 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
LRCH4O75427 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LRCH4O75427 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.31■■□□□ 1.32
LRCH4O75427 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
LRCH4O75427 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
LRCH4O75427 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.31■■□□□ 1.32
LRCH4O75427 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.3■■□□□ 1.32
LRCH4O75427 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.3■■□□□ 1.32
LRCH4O75427 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LRCH4O75427 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LRCH4O75427 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.3■■□□□ 1.32
LRCH4O75427 KRT16P3-201ENST00000439127 1283 ntBASIC23.3■■□□□ 1.32
LRCH4O75427 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.3■■□□□ 1.32
LRCH4O75427 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LRCH4O75427 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.3■■□□□ 1.32
LRCH4O75427 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LRCH4O75427 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
LRCH4O75427 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.29■■□□□ 1.32
LRCH4O75427 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.29■■□□□ 1.32
LRCH4O75427 LINC01529-204ENST00000636474 1715 ntBASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms