Protein–RNA interactions for Protein: O60291

MGRN1, E3 ubiquitin-protein ligase MGRN1, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MGRN1O60291 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.83■■□□□ 1.09
MGRN1O60291 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
MGRN1O60291 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MGRN1O60291 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MGRN1O60291 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
MGRN1O60291 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
MGRN1O60291 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MGRN1O60291 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
MGRN1O60291 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.83■■□□□ 1.09
MGRN1O60291 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
MGRN1O60291 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
MGRN1O60291 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MGRN1O60291 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MGRN1O60291 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.82■■□□□ 1.08
MGRN1O60291 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MGRN1O60291 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.82■■□□□ 1.08
MGRN1O60291 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.82■■□□□ 1.08
MGRN1O60291 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
MGRN1O60291 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.82■■□□□ 1.08
MGRN1O60291 AC005229.4-201ENST00000610085 2198 ntBASIC21.82■■□□□ 1.08
MGRN1O60291 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MGRN1O60291 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
MGRN1O60291 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
MGRN1O60291 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
MGRN1O60291 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
MGRN1O60291 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
MGRN1O60291 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.81■■□□□ 1.08
MGRN1O60291 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.81■■□□□ 1.08
MGRN1O60291 AC126177.7-201ENST00000547904 679 ntBASIC21.81■■□□□ 1.08
MGRN1O60291 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
MGRN1O60291 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
MGRN1O60291 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MGRN1O60291 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MGRN1O60291 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.8■■□□□ 1.08
MGRN1O60291 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
MGRN1O60291 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MGRN1O60291 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MGRN1O60291 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MGRN1O60291 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.79■■□□□ 1.08
MGRN1O60291 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MGRN1O60291 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.79■■□□□ 1.08
MGRN1O60291 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MGRN1O60291 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MGRN1O60291 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MGRN1O60291 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
MGRN1O60291 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
MGRN1O60291 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MGRN1O60291 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
MGRN1O60291 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.79■■□□□ 1.08
MGRN1O60291 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
MGRN1O60291 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
MGRN1O60291 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
MGRN1O60291 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MGRN1O60291 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MGRN1O60291 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.78■■□□□ 1.08
MGRN1O60291 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MGRN1O60291 AL391422.3-201ENST00000603791 2761 ntBASIC21.78■■□□□ 1.08
MGRN1O60291 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
MGRN1O60291 AC007952.6-201ENST00000573168 2673 ntBASIC21.78■■□□□ 1.08
MGRN1O60291 AC003957.1-201ENST00000625108 2673 ntBASIC21.78■■□□□ 1.08
MGRN1O60291 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.78■■□□□ 1.08
MGRN1O60291 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MGRN1O60291 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
MGRN1O60291 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MGRN1O60291 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MGRN1O60291 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MGRN1O60291 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.78■■□□□ 1.08
MGRN1O60291 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MGRN1O60291 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MGRN1O60291 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.77■■□□□ 1.08
MGRN1O60291 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MGRN1O60291 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MGRN1O60291 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MGRN1O60291 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
MGRN1O60291 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MGRN1O60291 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
MGRN1O60291 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.77■■□□□ 1.07
MGRN1O60291 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MGRN1O60291 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
MGRN1O60291 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MGRN1O60291 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
MGRN1O60291 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MGRN1O60291 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
MGRN1O60291 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
MGRN1O60291 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
MGRN1O60291 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
MGRN1O60291 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MGRN1O60291 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.76■■□□□ 1.07
MGRN1O60291 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
MGRN1O60291 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
MGRN1O60291 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MGRN1O60291 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
MGRN1O60291 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MGRN1O60291 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MGRN1O60291 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
MGRN1O60291 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MGRN1O60291 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MGRN1O60291 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MGRN1O60291 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MGRN1O60291 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms