Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TRAF3IP2O43734 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAF3IP2O43734 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAF3IP2O43734 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TRAF3IP2O43734 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.98■□□□□ 0.79
TRAF3IP2O43734 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.98■□□□□ 0.79
TRAF3IP2O43734 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAF3IP2O43734 AL117332.1-201ENST00000622628 974 ntBASIC19.98■□□□□ 0.79
TRAF3IP2O43734 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAF3IP2O43734 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAF3IP2O43734 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAF3IP2O43734 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAF3IP2O43734 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAF3IP2O43734 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAF3IP2O43734 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAF3IP2O43734 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAF3IP2O43734 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.97■□□□□ 0.79
TRAF3IP2O43734 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.97■□□□□ 0.79
TRAF3IP2O43734 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.97■□□□□ 0.79
TRAF3IP2O43734 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.97■□□□□ 0.79
TRAF3IP2O43734 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAF3IP2O43734 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAF3IP2O43734 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAF3IP2O43734 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAF3IP2O43734 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.97■□□□□ 0.79
TRAF3IP2O43734 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.96■□□□□ 0.79
TRAF3IP2O43734 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAF3IP2O43734 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAF3IP2O43734 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.96■□□□□ 0.79
TRAF3IP2O43734 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
TRAF3IP2O43734 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.96■□□□□ 0.79
TRAF3IP2O43734 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAF3IP2O43734 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TRAF3IP2O43734 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAF3IP2O43734 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAF3IP2O43734 MIR3621-201ENST00000580529 85 ntBASIC19.95■□□□□ 0.78
TRAF3IP2O43734 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.95■□□□□ 0.78
TRAF3IP2O43734 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAF3IP2O43734 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.95■□□□□ 0.78
TRAF3IP2O43734 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.95■□□□□ 0.78
TRAF3IP2O43734 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAF3IP2O43734 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.94■□□□□ 0.78
TRAF3IP2O43734 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.94■□□□□ 0.78
TRAF3IP2O43734 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
TRAF3IP2O43734 AL353803.4-201ENST00000565882 1934 ntBASIC19.94■□□□□ 0.78
TRAF3IP2O43734 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.94■□□□□ 0.78
TRAF3IP2O43734 C17orf82-201ENST00000623772 1530 ntBASIC19.94■□□□□ 0.78
TRAF3IP2O43734 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.94■□□□□ 0.78
TRAF3IP2O43734 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRAF3IP2O43734 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAF3IP2O43734 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRAF3IP2O43734 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TRAF3IP2O43734 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TRAF3IP2O43734 AL356740.2-201ENST00000601559 647 ntBASIC19.93■□□□□ 0.78
TRAF3IP2O43734 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.93■□□□□ 0.78
TRAF3IP2O43734 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.93■□□□□ 0.78
TRAF3IP2O43734 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRAF3IP2O43734 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
TRAF3IP2O43734 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRAF3IP2O43734 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAF3IP2O43734 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAF3IP2O43734 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAF3IP2O43734 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAF3IP2O43734 C9orf163-202ENST00000624034 2573 ntBASIC19.92■□□□□ 0.78
TRAF3IP2O43734 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
TRAF3IP2O43734 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.92■□□□□ 0.78
TRAF3IP2O43734 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
TRAF3IP2O43734 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAF3IP2O43734 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.92■□□□□ 0.78
TRAF3IP2O43734 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAF3IP2O43734 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAF3IP2O43734 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.91■□□□□ 0.78
TRAF3IP2O43734 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.91■□□□□ 0.78
TRAF3IP2O43734 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
TRAF3IP2O43734 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAF3IP2O43734 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.91■□□□□ 0.78
TRAF3IP2O43734 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAF3IP2O43734 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAF3IP2O43734 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.91■□□□□ 0.78
TRAF3IP2O43734 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAF3IP2O43734 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAF3IP2O43734 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAF3IP2O43734 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TRAF3IP2O43734 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAF3IP2O43734 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.9■□□□□ 0.78
TRAF3IP2O43734 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAF3IP2O43734 AC068473.5-201ENST00000616428 2072 ntBASIC19.9■□□□□ 0.78
TRAF3IP2O43734 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAF3IP2O43734 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAF3IP2O43734 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAF3IP2O43734 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.9■□□□□ 0.78
TRAF3IP2O43734 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.9■□□□□ 0.78
TRAF3IP2O43734 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAF3IP2O43734 FP325331.1-202ENST00000623531 1380 ntBASIC19.9■□□□□ 0.78
TRAF3IP2O43734 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAF3IP2O43734 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TRAF3IP2O43734 LINC01529-204ENST00000636474 1715 ntBASIC19.9■□□□□ 0.78
TRAF3IP2O43734 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAF3IP2O43734 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAF3IP2O43734 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms