Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.32■□□□□ 0.84
RNF13O43567 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF13O43567 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF13O43567 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF13O43567 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF13O43567 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF13O43567 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RNF13O43567 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF13O43567 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF13O43567 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF13O43567 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF13O43567 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF13O43567 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RNF13O43567 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF13O43567 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF13O43567 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF13O43567 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.31■□□□□ 0.84
RNF13O43567 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF13O43567 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.31■□□□□ 0.84
RNF13O43567 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
RNF13O43567 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF13O43567 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF13O43567 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RNF13O43567 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF13O43567 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RNF13O43567 LINC00565-201ENST00000562710 2331 ntBASIC20.31■□□□□ 0.84
RNF13O43567 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF13O43567 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
RNF13O43567 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF13O43567 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF13O43567 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF13O43567 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF13O43567 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF13O43567 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF13O43567 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RNF13O43567 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF13O43567 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF13O43567 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RNF13O43567 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF13O43567 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF13O43567 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF13O43567 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF13O43567 AC092068.2-201ENST00000590491 1708 ntBASIC20.3■□□□□ 0.84
RNF13O43567 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF13O43567 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RNF13O43567 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF13O43567 DUSP8P3-201ENST00000399571 1760 ntBASIC20.29■□□□□ 0.84
RNF13O43567 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF13O43567 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RNF13O43567 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF13O43567 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF13O43567 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF13O43567 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF13O43567 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF13O43567 AC021242.3-201ENST00000607598 1377 ntBASIC20.29■□□□□ 0.84
RNF13O43567 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF13O43567 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF13O43567 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF13O43567 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
RNF13O43567 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF13O43567 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
RNF13O43567 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RNF13O43567 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.28■□□□□ 0.84
RNF13O43567 KRT125P-201ENST00000546827 989 ntBASIC20.28■□□□□ 0.84
RNF13O43567 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF13O43567 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.27■□□□□ 0.84
RNF13O43567 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF13O43567 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF13O43567 C1orf229-201ENST00000623686 2258 ntBASIC20.27■□□□□ 0.84
RNF13O43567 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF13O43567 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF13O43567 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF13O43567 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF13O43567 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RNF13O43567 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF13O43567 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF13O43567 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF13O43567 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RNF13O43567 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF13O43567 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF13O43567 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RNF13O43567 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.26■□□□□ 0.83
RNF13O43567 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF13O43567 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF13O43567 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF13O43567 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF13O43567 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RNF13O43567 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RNF13O43567 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF13O43567 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF13O43567 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF13O43567 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF13O43567 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF13O43567 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF13O43567 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF13O43567 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF13O43567 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.25■□□□□ 0.83
RNF13O43567 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF13O43567 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF13O43567 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms