Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF9O43307 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF9O43307 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.57■□□□□ 0.88
ARHGEF9O43307 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ARHGEF9O43307 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF9O43307 AC022616.5-201ENST00000518796 181 ntBASIC20.57■□□□□ 0.88
ARHGEF9O43307 MIR4787-201ENST00000607364 84 ntBASIC20.57■□□□□ 0.88
ARHGEF9O43307 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF9O43307 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF9O43307 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF9O43307 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF9O43307 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF9O43307 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF9O43307 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF9O43307 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ARHGEF9O43307 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ARHGEF9O43307 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF9O43307 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF9O43307 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ARHGEF9O43307 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.56■□□□□ 0.88
ARHGEF9O43307 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.56■□□□□ 0.88
ARHGEF9O43307 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.56■□□□□ 0.88
ARHGEF9O43307 AC011551.1-201ENST00000614101 683 ntBASIC20.56■□□□□ 0.88
ARHGEF9O43307 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.56■□□□□ 0.88
ARHGEF9O43307 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF9O43307 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
ARHGEF9O43307 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF9O43307 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.56■□□□□ 0.88
ARHGEF9O43307 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF9O43307 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF9O43307 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF9O43307 AL024507.2-201ENST00000606070 2574 ntBASIC20.55■□□□□ 0.88
ARHGEF9O43307 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.55■□□□□ 0.88
ARHGEF9O43307 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF9O43307 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ARHGEF9O43307 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.55■□□□□ 0.88
ARHGEF9O43307 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF9O43307 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF9O43307 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF9O43307 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF9O43307 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF9O43307 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF9O43307 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF9O43307 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF9O43307 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
ARHGEF9O43307 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF9O43307 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ARHGEF9O43307 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
ARHGEF9O43307 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF9O43307 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF9O43307 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF9O43307 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF9O43307 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
ARHGEF9O43307 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF9O43307 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ARHGEF9O43307 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARHGEF9O43307 KRT16P3-201ENST00000439127 1283 ntBASIC20.53■□□□□ 0.88
ARHGEF9O43307 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.53■□□□□ 0.88
ARHGEF9O43307 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ARHGEF9O43307 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.53■□□□□ 0.88
ARHGEF9O43307 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.53■□□□□ 0.88
ARHGEF9O43307 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.53■□□□□ 0.88
ARHGEF9O43307 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ARHGEF9O43307 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ARHGEF9O43307 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARHGEF9O43307 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
ARHGEF9O43307 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ARHGEF9O43307 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ARHGEF9O43307 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ARHGEF9O43307 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ARHGEF9O43307 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ARHGEF9O43307 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ARHGEF9O43307 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ARHGEF9O43307 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ARHGEF9O43307 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.52■□□□□ 0.87
ARHGEF9O43307 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ARHGEF9O43307 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.51■□□□□ 0.87
ARHGEF9O43307 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ARHGEF9O43307 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.51■□□□□ 0.87
ARHGEF9O43307 DUSP8P5-201ENST00000422884 1815 ntBASIC20.51■□□□□ 0.87
ARHGEF9O43307 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ARHGEF9O43307 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
ARHGEF9O43307 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ARHGEF9O43307 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ARHGEF9O43307 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ARHGEF9O43307 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.51■□□□□ 0.87
ARHGEF9O43307 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.51■□□□□ 0.87
ARHGEF9O43307 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.51■□□□□ 0.87
ARHGEF9O43307 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.51■□□□□ 0.87
ARHGEF9O43307 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.51■□□□□ 0.87
ARHGEF9O43307 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ARHGEF9O43307 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ARHGEF9O43307 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ARHGEF9O43307 AL161729.1-201ENST00000604104 1402 ntBASIC20.51■□□□□ 0.87
ARHGEF9O43307 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ARHGEF9O43307 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ARHGEF9O43307 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ARHGEF9O43307 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
ARHGEF9O43307 AL022069.1-201ENST00000568025 1636 ntBASIC20.5■□□□□ 0.87
ARHGEF9O43307 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms