Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NKX2-8O15522 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
NKX2-8O15522 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NKX2-8O15522 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.89■□□□□ 0.93
NKX2-8O15522 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NKX2-8O15522 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NKX2-8O15522 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.89■□□□□ 0.93
NKX2-8O15522 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NKX2-8O15522 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NKX2-8O15522 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NKX2-8O15522 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NKX2-8O15522 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NKX2-8O15522 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NKX2-8O15522 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NKX2-8O15522 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NKX2-8O15522 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NKX2-8O15522 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NKX2-8O15522 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
NKX2-8O15522 KRT18P14-201ENST00000534205 1250 ntBASIC20.88■□□□□ 0.93
NKX2-8O15522 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.88■□□□□ 0.93
NKX2-8O15522 AC135731.1-201ENST00000569415 2548 ntBASIC20.88■□□□□ 0.93
NKX2-8O15522 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NKX2-8O15522 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NKX2-8O15522 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
NKX2-8O15522 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NKX2-8O15522 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NKX2-8O15522 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NKX2-8O15522 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NKX2-8O15522 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.87■□□□□ 0.93
NKX2-8O15522 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NKX2-8O15522 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.87■□□□□ 0.93
NKX2-8O15522 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NKX2-8O15522 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NKX2-8O15522 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NKX2-8O15522 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NKX2-8O15522 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NKX2-8O15522 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NKX2-8O15522 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NKX2-8O15522 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.86■□□□□ 0.93
NKX2-8O15522 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.86■□□□□ 0.93
NKX2-8O15522 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
NKX2-8O15522 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
NKX2-8O15522 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.86■□□□□ 0.93
NKX2-8O15522 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
NKX2-8O15522 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NKX2-8O15522 AL499627.2-201ENST00000606283 725 ntBASIC20.86■□□□□ 0.93
NKX2-8O15522 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
NKX2-8O15522 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
NKX2-8O15522 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NKX2-8O15522 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.86■□□□□ 0.93
NKX2-8O15522 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NKX2-8O15522 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NKX2-8O15522 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.85■□□□□ 0.93
NKX2-8O15522 ID1-201ENST00000376105 1233 ntBASIC20.85■□□□□ 0.93
NKX2-8O15522 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.85■□□□□ 0.93
NKX2-8O15522 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.85■□□□□ 0.93
NKX2-8O15522 LINC02228-203ENST00000641970 1355 ntBASIC20.85■□□□□ 0.93
NKX2-8O15522 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NKX2-8O15522 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NKX2-8O15522 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
NKX2-8O15522 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NKX2-8O15522 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NKX2-8O15522 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
NKX2-8O15522 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.84■□□□□ 0.93
NKX2-8O15522 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.84■□□□□ 0.93
NKX2-8O15522 TERF1P2-201ENST00000583350 1212 ntBASIC20.84■□□□□ 0.93
NKX2-8O15522 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NKX2-8O15522 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NKX2-8O15522 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NKX2-8O15522 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.84■□□□□ 0.93
NKX2-8O15522 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NKX2-8O15522 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.83■□□□□ 0.93
NKX2-8O15522 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
NKX2-8O15522 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
NKX2-8O15522 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NKX2-8O15522 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NKX2-8O15522 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.83■□□□□ 0.92
NKX2-8O15522 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NKX2-8O15522 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NKX2-8O15522 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NKX2-8O15522 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NKX2-8O15522 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
NKX2-8O15522 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.82■□□□□ 0.92
NKX2-8O15522 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NKX2-8O15522 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NKX2-8O15522 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NKX2-8O15522 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NKX2-8O15522 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NKX2-8O15522 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NKX2-8O15522 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.81■□□□□ 0.92
NKX2-8O15522 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NKX2-8O15522 OR2I1P-207ENST00000453522 948 ntBASIC20.81■□□□□ 0.92
NKX2-8O15522 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.81■□□□□ 0.92
NKX2-8O15522 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NKX2-8O15522 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
NKX2-8O15522 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NKX2-8O15522 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NKX2-8O15522 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
NKX2-8O15522 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NKX2-8O15522 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms