Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
SPTLC1O15269 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SPTLC1O15269 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
SPTLC1O15269 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
SPTLC1O15269 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SPTLC1O15269 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
SPTLC1O15269 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
SPTLC1O15269 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.03■■□□□ 1.44
SPTLC1O15269 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.03■■□□□ 1.44
SPTLC1O15269 AL355001.2-201ENST00000620617 1191 ntBASIC24.03■■□□□ 1.44
SPTLC1O15269 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SPTLC1O15269 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SPTLC1O15269 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SPTLC1O15269 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
SPTLC1O15269 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.03■■□□□ 1.44
SPTLC1O15269 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SPTLC1O15269 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SPTLC1O15269 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SPTLC1O15269 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SPTLC1O15269 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.02■■□□□ 1.44
SPTLC1O15269 GRAMD4P4-201ENST00000613563 1115 ntBASIC24.02■■□□□ 1.44
SPTLC1O15269 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC24.02■■□□□ 1.44
SPTLC1O15269 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SPTLC1O15269 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SPTLC1O15269 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SPTLC1O15269 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SPTLC1O15269 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.02■■□□□ 1.44
SPTLC1O15269 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SPTLC1O15269 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.01■■□□□ 1.43
SPTLC1O15269 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SPTLC1O15269 AP001330.3-201ENST00000520123 633 ntBASIC24.01■■□□□ 1.43
SPTLC1O15269 AC136469.2-201ENST00000623944 1028 ntBASIC24.01■■□□□ 1.43
SPTLC1O15269 AL136967.2-201ENST00000623968 743 ntBASIC24.01■■□□□ 1.43
SPTLC1O15269 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC24.01■■□□□ 1.43
SPTLC1O15269 AC144652.1-201ENST00000609974 1624 ntBASIC24.01■■□□□ 1.43
SPTLC1O15269 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SPTLC1O15269 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SPTLC1O15269 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SPTLC1O15269 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC24.01■■□□□ 1.43
SPTLC1O15269 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SPTLC1O15269 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC24■■□□□ 1.43
SPTLC1O15269 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24■■□□□ 1.43
SPTLC1O15269 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC24■■□□□ 1.43
SPTLC1O15269 AF213884.3-201ENST00000563833 479 ntBASIC24■■□□□ 1.43
SPTLC1O15269 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24■■□□□ 1.43
SPTLC1O15269 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24■■□□□ 1.43
SPTLC1O15269 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
SPTLC1O15269 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24■■□□□ 1.43
SPTLC1O15269 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SPTLC1O15269 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SPTLC1O15269 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
SPTLC1O15269 AC079630.1-202ENST00000618127 1840 ntBASIC23.99■■□□□ 1.43
SPTLC1O15269 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
SPTLC1O15269 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SPTLC1O15269 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.99■■□□□ 1.43
SPTLC1O15269 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.99■■□□□ 1.43
SPTLC1O15269 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
SPTLC1O15269 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.98■■□□□ 1.43
SPTLC1O15269 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SPTLC1O15269 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
SPTLC1O15269 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
SPTLC1O15269 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
SPTLC1O15269 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SPTLC1O15269 MIR939-201ENST00000401314 82 ntBASIC23.98■■□□□ 1.43
SPTLC1O15269 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.98■■□□□ 1.43
SPTLC1O15269 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SPTLC1O15269 DUX4L4-201ENST00000566884 1269 ntBASIC23.98■■□□□ 1.43
SPTLC1O15269 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SPTLC1O15269 FP325331.1-202ENST00000623531 1380 ntBASIC23.98■■□□□ 1.43
SPTLC1O15269 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
SPTLC1O15269 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.98■■□□□ 1.43
SPTLC1O15269 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
SPTLC1O15269 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SPTLC1O15269 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.98■■□□□ 1.43
SPTLC1O15269 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SPTLC1O15269 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.98■■□□□ 1.43
SPTLC1O15269 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
SPTLC1O15269 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
SPTLC1O15269 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.97■■□□□ 1.43
SPTLC1O15269 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SPTLC1O15269 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SPTLC1O15269 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SPTLC1O15269 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SPTLC1O15269 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.97■■□□□ 1.43
SPTLC1O15269 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SPTLC1O15269 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SPTLC1O15269 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.97■■□□□ 1.43
SPTLC1O15269 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SPTLC1O15269 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SPTLC1O15269 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
SPTLC1O15269 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
SPTLC1O15269 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SPTLC1O15269 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.96■■□□□ 1.43
SPTLC1O15269 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
SPTLC1O15269 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.96■■□□□ 1.43
SPTLC1O15269 LINC01529-204ENST00000636474 1715 ntBASIC23.96■■□□□ 1.43
SPTLC1O15269 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.95■■□□□ 1.43
SPTLC1O15269 AC093323.1-202ENST00000635031 2045 ntBASIC23.95■■□□□ 1.42
SPTLC1O15269 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SPTLC1O15269 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms