Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC37.11■■■■□ 3.53
CHD1O14646 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC37.11■■■■□ 3.53
CHD1O14646 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC37.11■■■■□ 3.53
CHD1O14646 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC37.11■■■■□ 3.53
CHD1O14646 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC37.11■■■■□ 3.53
CHD1O14646 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC37.11■■■■□ 3.53
CHD1O14646 MFF-208ENST00000409616 1247 ntTSL 5 BASIC37.1■■■■□ 3.53
CHD1O14646 AC069152.1-201ENST00000438030 544 ntBASIC37.1■■■■□ 3.53
CHD1O14646 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC37.1■■■■□ 3.53
CHD1O14646 MIR6089-201ENST00000616698 64 ntBASIC37.1■■■■□ 3.53
CHD1O14646 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
CHD1O14646 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC37.1■■■■□ 3.53
CHD1O14646 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC37.09■■■■□ 3.53
CHD1O14646 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC37.09■■■■□ 3.53
CHD1O14646 METTL15-202ENST00000403099 795 ntTSL 5 BASIC37.09■■■■□ 3.53
CHD1O14646 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC37.09■■■■□ 3.53
CHD1O14646 AC098934.4-201ENST00000564127 592 ntBASIC37.09■■■■□ 3.53
CHD1O14646 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC37.09■■■■□ 3.53
CHD1O14646 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC37.08■■■■□ 3.53
CHD1O14646 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC37.08■■■■□ 3.53
CHD1O14646 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC37.08■■■■□ 3.53
CHD1O14646 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC37.08■■■■□ 3.53
CHD1O14646 KLF13-207ENST00000560473 489 ntTSL 3 BASIC37.08■■■■□ 3.53
CHD1O14646 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC37.08■■■■□ 3.53
CHD1O14646 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC37.08■■■■□ 3.53
CHD1O14646 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC37.08■■■■□ 3.53
CHD1O14646 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC37.08■■■■□ 3.53
CHD1O14646 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC37.07■■■■□ 3.53
CHD1O14646 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC37.07■■■■□ 3.53
CHD1O14646 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC37.07■■■■□ 3.53
CHD1O14646 MFSD11-216ENST00000590393 1141 ntBASIC37.07■■■■□ 3.52
CHD1O14646 CD37-213ENST00000598095 1598 ntTSL 2 BASIC37.07■■■■□ 3.52
CHD1O14646 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC37.07■■■■□ 3.52
CHD1O14646 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC37.06■■■■□ 3.52
CHD1O14646 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC37.06■■■■□ 3.52
CHD1O14646 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC37.05■■■■□ 3.52
CHD1O14646 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC37.05■■■■□ 3.52
CHD1O14646 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC37.05■■■■□ 3.52
CHD1O14646 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC37.05■■■■□ 3.52
CHD1O14646 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC37.05■■■■□ 3.52
CHD1O14646 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC37.05■■■■□ 3.52
CHD1O14646 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC37.05■■■■□ 3.52
CHD1O14646 AL138781.1-201ENST00000566567 1274 ntBASIC37.05■■■■□ 3.52
CHD1O14646 AC011767.1-201ENST00000617410 1153 ntBASIC37.05■■■■□ 3.52
CHD1O14646 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC37.04■■■■□ 3.52
CHD1O14646 TSPY6P-201ENST00000448518 926 ntBASIC37.04■■■■□ 3.52
CHD1O14646 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC37.04■■■■□ 3.52
CHD1O14646 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC37.04■■■■□ 3.52
CHD1O14646 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC37.04■■■■□ 3.52
CHD1O14646 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC37.04■■■■□ 3.52
CHD1O14646 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC37.04■■■■□ 3.52
CHD1O14646 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC37.04■■■■□ 3.52
CHD1O14646 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC37.03■■■■□ 3.52
CHD1O14646 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
CHD1O14646 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC37.03■■■■□ 3.52
CHD1O14646 KRT19P1-201ENST00000405746 1186 ntBASIC37.03■■■■□ 3.52
CHD1O14646 ARL16-209ENST00000573715 763 ntTSL 3 BASIC37.03■■■■□ 3.52
CHD1O14646 ARL16-211ENST00000576135 694 ntTSL 3 BASIC37.03■■■■□ 3.52
CHD1O14646 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
CHD1O14646 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC37.03■■■■□ 3.52
CHD1O14646 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
CHD1O14646 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC37.02■■■■□ 3.52
CHD1O14646 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC37.02■■■■□ 3.52
CHD1O14646 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC37.02■■■■□ 3.52
CHD1O14646 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC37.02■■■■□ 3.52
CHD1O14646 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC37.02■■■■□ 3.52
CHD1O14646 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
CHD1O14646 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC37.02■■■■□ 3.52
CHD1O14646 AC087239.1-201ENST00000622671 572 ntBASIC37.02■■■■□ 3.52
CHD1O14646 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.52
CHD1O14646 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.52
CHD1O14646 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.51
CHD1O14646 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC37.01■■■■□ 3.51
CHD1O14646 AL121832.2-201ENST00000610979 668 ntBASIC37.01■■■■□ 3.51
CHD1O14646 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC37■■■■□ 3.51
CHD1O14646 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
CHD1O14646 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC37■■■■□ 3.51
CHD1O14646 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
CHD1O14646 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC36.99■■■■□ 3.51
CHD1O14646 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC36.99■■■■□ 3.51
CHD1O14646 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC36.99■■■■□ 3.51
CHD1O14646 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC36.99■■■■□ 3.51
CHD1O14646 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
CHD1O14646 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC36.99■■■■□ 3.51
CHD1O14646 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC36.98■■■■□ 3.51
CHD1O14646 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC36.98■■■■□ 3.51
CHD1O14646 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC36.98■■■■□ 3.51
CHD1O14646 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
CHD1O14646 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC36.98■■■■□ 3.51
CHD1O14646 SPI1-203ENST00000533030 661 ntTSL 2 BASIC36.98■■■■□ 3.51
CHD1O14646 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC36.98■■■■□ 3.51
CHD1O14646 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC36.98■■■■□ 3.51
CHD1O14646 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC36.98■■■■□ 3.51
CHD1O14646 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC36.98■■■■□ 3.51
CHD1O14646 AC010501.1-201ENST00000606270 1962 ntBASIC36.98■■■■□ 3.51
CHD1O14646 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC36.97■■■■□ 3.51
CHD1O14646 MAZ-216ENST00000616501 991 ntTSL 5 BASIC36.97■■■■□ 3.51
CHD1O14646 TFG-210ENST00000620299 1289 ntTSL 5 BASIC36.97■■■■□ 3.51
CHD1O14646 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC36.97■■■■□ 3.51
CHD1O14646 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC36.97■■■■□ 3.51
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms