Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COLCA2A8K830 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.39■□□□□ 0.37
COLCA2A8K830 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COLCA2A8K830 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COLCA2A8K830 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.39■□□□□ 0.37
COLCA2A8K830 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COLCA2A8K830 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COLCA2A8K830 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
COLCA2A8K830 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COLCA2A8K830 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.38■□□□□ 0.37
COLCA2A8K830 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.38■□□□□ 0.37
COLCA2A8K830 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.38■□□□□ 0.37
COLCA2A8K830 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COLCA2A8K830 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COLCA2A8K830 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COLCA2A8K830 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COLCA2A8K830 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.37■□□□□ 0.37
COLCA2A8K830 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COLCA2A8K830 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COLCA2A8K830 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
COLCA2A8K830 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COLCA2A8K830 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COLCA2A8K830 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COLCA2A8K830 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COLCA2A8K830 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COLCA2A8K830 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
COLCA2A8K830 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
COLCA2A8K830 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
COLCA2A8K830 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.37■□□□□ 0.37
COLCA2A8K830 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COLCA2A8K830 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
COLCA2A8K830 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COLCA2A8K830 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COLCA2A8K830 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
COLCA2A8K830 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.36■□□□□ 0.37
COLCA2A8K830 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.36■□□□□ 0.37
COLCA2A8K830 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
COLCA2A8K830 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COLCA2A8K830 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
COLCA2A8K830 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COLCA2A8K830 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.36■□□□□ 0.37
COLCA2A8K830 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COLCA2A8K830 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COLCA2A8K830 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA2A8K830 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA2A8K830 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.35■□□□□ 0.37
COLCA2A8K830 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA2A8K830 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA2A8K830 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA2A8K830 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.35■□□□□ 0.37
COLCA2A8K830 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA2A8K830 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA2A8K830 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA2A8K830 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA2A8K830 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA2A8K830 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA2A8K830 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA2A8K830 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
COLCA2A8K830 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.35■□□□□ 0.37
COLCA2A8K830 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
COLCA2A8K830 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COLCA2A8K830 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
COLCA2A8K830 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
COLCA2A8K830 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.34■□□□□ 0.37
COLCA2A8K830 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COLCA2A8K830 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COLCA2A8K830 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COLCA2A8K830 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COLCA2A8K830 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
COLCA2A8K830 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
COLCA2A8K830 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COLCA2A8K830 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COLCA2A8K830 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
COLCA2A8K830 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COLCA2A8K830 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.34■□□□□ 0.37
COLCA2A8K830 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
COLCA2A8K830 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.34■□□□□ 0.37
COLCA2A8K830 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
COLCA2A8K830 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COLCA2A8K830 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COLCA2A8K830 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
COLCA2A8K830 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.33■□□□□ 0.37
COLCA2A8K830 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.33■□□□□ 0.37
COLCA2A8K830 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
COLCA2A8K830 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
COLCA2A8K830 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
COLCA2A8K830 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
COLCA2A8K830 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COLCA2A8K830 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.33■□□□□ 0.36
COLCA2A8K830 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COLCA2A8K830 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.33■□□□□ 0.36
COLCA2A8K830 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COLCA2A8K830 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
COLCA2A8K830 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COLCA2A8K830 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
COLCA2A8K830 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
COLCA2A8K830 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.32■□□□□ 0.36
COLCA2A8K830 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.32■□□□□ 0.36
COLCA2A8K830 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
COLCA2A8K830 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms