Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 pRNA.11-201ENST00000618423 90 ntBASIC33.5■■■□□ 2.95
HFM1A2PYH4 pRNA.13-201ENST00000619112 90 ntBASIC33.5■■■□□ 2.95
HFM1A2PYH4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
HFM1A2PYH4 AC093323.1-202ENST00000635031 2045 ntBASIC33.5■■■□□ 2.95
HFM1A2PYH4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
HFM1A2PYH4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
HFM1A2PYH4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
HFM1A2PYH4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC33.48■■■□□ 2.95
HFM1A2PYH4 GRAMD4P4-201ENST00000613563 1115 ntBASIC33.48■■■□□ 2.95
HFM1A2PYH4 AL355001.2-201ENST00000620617 1191 ntBASIC33.48■■■□□ 2.95
HFM1A2PYH4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC33.47■■■□□ 2.95
HFM1A2PYH4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
HFM1A2PYH4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
HFM1A2PYH4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC33.47■■■□□ 2.95
HFM1A2PYH4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
HFM1A2PYH4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC33.47■■■□□ 2.95
HFM1A2PYH4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
HFM1A2PYH4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC33.46■■■□□ 2.95
HFM1A2PYH4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC33.46■■■□□ 2.95
HFM1A2PYH4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
HFM1A2PYH4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC33.46■■■□□ 2.95
HFM1A2PYH4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC33.45■■■□□ 2.95
HFM1A2PYH4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC33.45■■■□□ 2.95
HFM1A2PYH4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.94
HFM1A2PYH4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC33.45■■■□□ 2.94
HFM1A2PYH4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC33.45■■■□□ 2.94
HFM1A2PYH4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.94
HFM1A2PYH4 AL136967.2-201ENST00000623968 743 ntBASIC33.45■■■□□ 2.94
HFM1A2PYH4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
HFM1A2PYH4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
HFM1A2PYH4 LINC01529-204ENST00000636474 1715 ntBASIC33.44■■■□□ 2.94
HFM1A2PYH4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC33.43■■■□□ 2.94
HFM1A2PYH4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
HFM1A2PYH4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC33.43■■■□□ 2.94
HFM1A2PYH4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
HFM1A2PYH4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC33.43■■■□□ 2.94
HFM1A2PYH4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
HFM1A2PYH4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC33.43■■■□□ 2.94
HFM1A2PYH4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
HFM1A2PYH4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
HFM1A2PYH4 AC027682.1-201ENST00000562846 899 ntBASIC33.43■■■□□ 2.94
HFM1A2PYH4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
HFM1A2PYH4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
HFM1A2PYH4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC33.42■■■□□ 2.94
HFM1A2PYH4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC33.42■■■□□ 2.94
HFM1A2PYH4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC33.42■■■□□ 2.94
HFM1A2PYH4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC33.42■■■□□ 2.94
HFM1A2PYH4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC33.42■■■□□ 2.94
HFM1A2PYH4 AC142381.2-201ENST00000566120 298 ntBASIC33.42■■■□□ 2.94
HFM1A2PYH4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC33.42■■■□□ 2.94
HFM1A2PYH4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC33.42■■■□□ 2.94
HFM1A2PYH4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
HFM1A2PYH4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
HFM1A2PYH4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC33.41■■■□□ 2.94
HFM1A2PYH4 AC091305.1-201ENST00000479476 895 ntBASIC33.41■■■□□ 2.94
HFM1A2PYH4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC33.41■■■□□ 2.94
HFM1A2PYH4 AC133637.1-201ENST00000624115 1537 ntBASIC33.4■■■□□ 2.94
HFM1A2PYH4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC33.4■■■□□ 2.94
HFM1A2PYH4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC33.4■■■□□ 2.94
HFM1A2PYH4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
HFM1A2PYH4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC33.4■■■□□ 2.94
HFM1A2PYH4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
HFM1A2PYH4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
HFM1A2PYH4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
HFM1A2PYH4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC33.39■■■□□ 2.94
HFM1A2PYH4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC33.39■■■□□ 2.94
HFM1A2PYH4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC33.39■■■□□ 2.94
HFM1A2PYH4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC33.39■■■□□ 2.94
HFM1A2PYH4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC33.38■■■□□ 2.93
HFM1A2PYH4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
HFM1A2PYH4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
HFM1A2PYH4 SLC47A1P1-202ENST00000449666 945 ntBASIC33.38■■■□□ 2.93
HFM1A2PYH4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
HFM1A2PYH4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC33.38■■■□□ 2.93
HFM1A2PYH4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC33.38■■■□□ 2.93
HFM1A2PYH4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC33.38■■■□□ 2.93
HFM1A2PYH4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
HFM1A2PYH4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
HFM1A2PYH4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC33.38■■■□□ 2.93
HFM1A2PYH4 AC092068.2-201ENST00000590491 1708 ntBASIC33.38■■■□□ 2.93
HFM1A2PYH4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC33.38■■■□□ 2.93
HFM1A2PYH4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC33.38■■■□□ 2.93
HFM1A2PYH4 MAG-206ENST00000597035 542 ntTSL 4 BASIC33.37■■■□□ 2.93
HFM1A2PYH4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
HFM1A2PYH4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC33.37■■■□□ 2.93
HFM1A2PYH4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC33.37■■■□□ 2.93
HFM1A2PYH4 OR2I1P-207ENST00000453522 948 ntBASIC33.36■■■□□ 2.93
HFM1A2PYH4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC33.36■■■□□ 2.93
HFM1A2PYH4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
HFM1A2PYH4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC33.36■■■□□ 2.93
HFM1A2PYH4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC33.36■■■□□ 2.93
HFM1A2PYH4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
HFM1A2PYH4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC33.36■■■□□ 2.93
HFM1A2PYH4 BX842568.3-201ENST00000418104 571 ntBASIC33.36■■■□□ 2.93
HFM1A2PYH4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC33.36■■■□□ 2.93
HFM1A2PYH4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC33.36■■■□□ 2.93
HFM1A2PYH4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC33.35■■■□□ 2.93
HFM1A2PYH4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC33.35■■■□□ 2.93
HFM1A2PYH4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC33.35■■■□□ 2.93
HFM1A2PYH4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC33.35■■■□□ 2.93
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms