Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV27A0A0K0K1C4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV27A0A0K0K1C4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV27A0A0K0K1C4 C11orf96-202ENST00000528572 1834 ntBASIC15.86■□□□□ 0.13
TRBV27A0A0K0K1C4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV27A0A0K0K1C4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV27A0A0K0K1C4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV27A0A0K0K1C4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV27A0A0K0K1C4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC15.86■□□□□ 0.13
TRBV27A0A0K0K1C4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV27A0A0K0K1C4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TRBV27A0A0K0K1C4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TRBV27A0A0K0K1C4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV27A0A0K0K1C4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC15.85■□□□□ 0.13
TRBV27A0A0K0K1C4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TRBV27A0A0K0K1C4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV27A0A0K0K1C4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TRBV27A0A0K0K1C4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TRBV27A0A0K0K1C4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV27A0A0K0K1C4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV27A0A0K0K1C4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV27A0A0K0K1C4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
TRBV27A0A0K0K1C4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC15.85■□□□□ 0.13
TRBV27A0A0K0K1C4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC15.85■□□□□ 0.13
TRBV27A0A0K0K1C4 MIR7108-201ENST00000614319 87 ntBASIC15.85■□□□□ 0.13
TRBV27A0A0K0K1C4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV27A0A0K0K1C4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV27A0A0K0K1C4 AC139530.1-201ENST00000575312 1977 ntBASIC15.85■□□□□ 0.13
TRBV27A0A0K0K1C4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV27A0A0K0K1C4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC15.85■□□□□ 0.13
TRBV27A0A0K0K1C4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV27A0A0K0K1C4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV27A0A0K0K1C4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRBV27A0A0K0K1C4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV27A0A0K0K1C4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRBV27A0A0K0K1C4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRBV27A0A0K0K1C4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC15.84■□□□□ 0.13
TRBV27A0A0K0K1C4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
TRBV27A0A0K0K1C4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRBV27A0A0K0K1C4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV27A0A0K0K1C4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV27A0A0K0K1C4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV27A0A0K0K1C4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
TRBV27A0A0K0K1C4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC15.84■□□□□ 0.13
TRBV27A0A0K0K1C4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV27A0A0K0K1C4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV27A0A0K0K1C4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV27A0A0K0K1C4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
TRBV27A0A0K0K1C4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRBV27A0A0K0K1C4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV27A0A0K0K1C4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC15.83■□□□□ 0.12
TRBV27A0A0K0K1C4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV27A0A0K0K1C4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV27A0A0K0K1C4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV27A0A0K0K1C4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRBV27A0A0K0K1C4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV27A0A0K0K1C4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV27A0A0K0K1C4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
TRBV27A0A0K0K1C4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV27A0A0K0K1C4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC15.82■□□□□ 0.12
TRBV27A0A0K0K1C4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV27A0A0K0K1C4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV27A0A0K0K1C4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV27A0A0K0K1C4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV27A0A0K0K1C4 LONRF2P2-201ENST00000439212 571 ntBASIC15.82■□□□□ 0.12
TRBV27A0A0K0K1C4 SPCS2P3-201ENST00000500401 656 ntBASIC15.82■□□□□ 0.12
TRBV27A0A0K0K1C4 MIR6765-201ENST00000614092 87 ntBASIC15.82■□□□□ 0.12
TRBV27A0A0K0K1C4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV27A0A0K0K1C4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV27A0A0K0K1C4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRBV27A0A0K0K1C4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC15.82■□□□□ 0.12
TRBV27A0A0K0K1C4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRBV27A0A0K0K1C4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV27A0A0K0K1C4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV27A0A0K0K1C4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV27A0A0K0K1C4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRBV27A0A0K0K1C4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TRBV27A0A0K0K1C4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRBV27A0A0K0K1C4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC15.81■□□□□ 0.12
TRBV27A0A0K0K1C4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRBV27A0A0K0K1C4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRBV27A0A0K0K1C4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV27A0A0K0K1C4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC15.8■□□□□ 0.12
TRBV27A0A0K0K1C4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV27A0A0K0K1C4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV27A0A0K0K1C4 PKD1P6-201ENST00000343738 4769 ntBASIC15.8■□□□□ 0.12
TRBV27A0A0K0K1C4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV27A0A0K0K1C4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC15.8■□□□□ 0.12
TRBV27A0A0K0K1C4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
TRBV27A0A0K0K1C4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV27A0A0K0K1C4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV27A0A0K0K1C4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV27A0A0K0K1C4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV27A0A0K0K1C4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV27A0A0K0K1C4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV27A0A0K0K1C4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV27A0A0K0K1C4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC15.79■□□□□ 0.12
TRBV27A0A0K0K1C4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC15.79■□□□□ 0.12
TRBV27A0A0K0K1C4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC15.79■□□□□ 0.12
TRBV27A0A0K0K1C4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms