Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV17A0A0B4J275 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV17A0A0B4J275 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV17A0A0B4J275 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
TRAV17A0A0B4J275 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV17A0A0B4J275 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
TRAV17A0A0B4J275 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.39■□□□□ 0.85
TRAV17A0A0B4J275 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.39■□□□□ 0.85
TRAV17A0A0B4J275 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV17A0A0B4J275 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV17A0A0B4J275 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV17A0A0B4J275 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV17A0A0B4J275 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV17A0A0B4J275 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.38■□□□□ 0.85
TRAV17A0A0B4J275 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV17A0A0B4J275 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV17A0A0B4J275 OR2I1P-207ENST00000453522 948 ntBASIC20.38■□□□□ 0.85
TRAV17A0A0B4J275 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.38■□□□□ 0.85
TRAV17A0A0B4J275 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV17A0A0B4J275 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.38■□□□□ 0.85
TRAV17A0A0B4J275 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV17A0A0B4J275 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV17A0A0B4J275 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.38■□□□□ 0.85
TRAV17A0A0B4J275 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV17A0A0B4J275 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.38■□□□□ 0.85
TRAV17A0A0B4J275 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV17A0A0B4J275 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TRAV17A0A0B4J275 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV17A0A0B4J275 LINC01529-204ENST00000636474 1715 ntBASIC20.37■□□□□ 0.85
TRAV17A0A0B4J275 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TRAV17A0A0B4J275 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV17A0A0B4J275 AC027612.3-201ENST00000413684 1047 ntBASIC20.37■□□□□ 0.85
TRAV17A0A0B4J275 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.37■□□□□ 0.85
TRAV17A0A0B4J275 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.37■□□□□ 0.85
TRAV17A0A0B4J275 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
TRAV17A0A0B4J275 AL354811.1-201ENST00000610286 706 ntBASIC20.37■□□□□ 0.85
TRAV17A0A0B4J275 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.37■□□□□ 0.85
TRAV17A0A0B4J275 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV17A0A0B4J275 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV17A0A0B4J275 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV17A0A0B4J275 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
TRAV17A0A0B4J275 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV17A0A0B4J275 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV17A0A0B4J275 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV17A0A0B4J275 AC138932.3-201ENST00000567634 1902 ntBASIC20.37■□□□□ 0.85
TRAV17A0A0B4J275 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV17A0A0B4J275 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV17A0A0B4J275 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV17A0A0B4J275 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV17A0A0B4J275 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV17A0A0B4J275 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV17A0A0B4J275 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TRAV17A0A0B4J275 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.36■□□□□ 0.85
TRAV17A0A0B4J275 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.36■□□□□ 0.85
TRAV17A0A0B4J275 AC144652.1-201ENST00000609974 1624 ntBASIC20.36■□□□□ 0.85
TRAV17A0A0B4J275 AC123595.1-201ENST00000440769 1046 ntBASIC20.36■□□□□ 0.85
TRAV17A0A0B4J275 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.36■□□□□ 0.85
TRAV17A0A0B4J275 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV17A0A0B4J275 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.36■□□□□ 0.85
TRAV17A0A0B4J275 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV17A0A0B4J275 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.36■□□□□ 0.85
TRAV17A0A0B4J275 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.36■□□□□ 0.85
TRAV17A0A0B4J275 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV17A0A0B4J275 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.35■□□□□ 0.85
TRAV17A0A0B4J275 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TRAV17A0A0B4J275 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TRAV17A0A0B4J275 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.35■□□□□ 0.85
TRAV17A0A0B4J275 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV17A0A0B4J275 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV17A0A0B4J275 AC012414.1-201ENST00000556676 535 ntBASIC20.35■□□□□ 0.85
TRAV17A0A0B4J275 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV17A0A0B4J275 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.35■□□□□ 0.85
TRAV17A0A0B4J275 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.35■□□□□ 0.85
TRAV17A0A0B4J275 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TRAV17A0A0B4J275 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.34■□□□□ 0.85
TRAV17A0A0B4J275 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV17A0A0B4J275 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
TRAV17A0A0B4J275 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.34■□□□□ 0.85
TRAV17A0A0B4J275 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.34■□□□□ 0.85
TRAV17A0A0B4J275 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV17A0A0B4J275 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV17A0A0B4J275 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.34■□□□□ 0.85
TRAV17A0A0B4J275 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.34■□□□□ 0.85
TRAV17A0A0B4J275 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV17A0A0B4J275 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.34■□□□□ 0.85
TRAV17A0A0B4J275 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV17A0A0B4J275 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV17A0A0B4J275 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV17A0A0B4J275 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.34■□□□□ 0.85
TRAV17A0A0B4J275 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV17A0A0B4J275 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV17A0A0B4J275 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV17A0A0B4J275 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV17A0A0B4J275 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV17A0A0B4J275 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV17A0A0B4J275 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.33■□□□□ 0.85
TRAV17A0A0B4J275 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRAV17A0A0B4J275 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRAV17A0A0B4J275 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRAV17A0A0B4J275 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms