Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV16A0A0A6YYK6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
TRAV16A0A0A6YYK6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV16A0A0A6YYK6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV16A0A0A6YYK6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV16A0A0A6YYK6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV16A0A0A6YYK6 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV16A0A0A6YYK6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TRAV16A0A0A6YYK6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV16A0A0A6YYK6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TRAV16A0A0A6YYK6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
TRAV16A0A0A6YYK6 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV16A0A0A6YYK6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV16A0A0A6YYK6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TRAV16A0A0A6YYK6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV16A0A0A6YYK6 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV16A0A0A6YYK6 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TRAV16A0A0A6YYK6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV16A0A0A6YYK6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV16A0A0A6YYK6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV16A0A0A6YYK6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV16A0A0A6YYK6 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV16A0A0A6YYK6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRAV16A0A0A6YYK6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV16A0A0A6YYK6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV16A0A0A6YYK6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TRAV16A0A0A6YYK6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV16A0A0A6YYK6 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV16A0A0A6YYK6 BHLHE23-202ENST00000612929 1109 ntBASIC15.51■□□□□ 0.07
TRAV16A0A0A6YYK6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV16A0A0A6YYK6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV16A0A0A6YYK6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV16A0A0A6YYK6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV16A0A0A6YYK6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV16A0A0A6YYK6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV16A0A0A6YYK6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV16A0A0A6YYK6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV16A0A0A6YYK6 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV16A0A0A6YYK6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV16A0A0A6YYK6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV16A0A0A6YYK6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV16A0A0A6YYK6 TSPY13P-201ENST00000338964 914 ntBASIC15.5■□□□□ 0.07
TRAV16A0A0A6YYK6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV16A0A0A6YYK6 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV16A0A0A6YYK6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TRAV16A0A0A6YYK6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV16A0A0A6YYK6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV16A0A0A6YYK6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV16A0A0A6YYK6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV16A0A0A6YYK6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV16A0A0A6YYK6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV16A0A0A6YYK6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV16A0A0A6YYK6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRAV16A0A0A6YYK6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV16A0A0A6YYK6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV16A0A0A6YYK6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRAV16A0A0A6YYK6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV16A0A0A6YYK6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV16A0A0A6YYK6 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV16A0A0A6YYK6 RPS2P7-201ENST00000447334 885 ntBASIC15.49■□□□□ 0.07
TRAV16A0A0A6YYK6 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC15.49■□□□□ 0.07
TRAV16A0A0A6YYK6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV16A0A0A6YYK6 AC074183.2-201ENST00000623112 922 ntBASIC15.49■□□□□ 0.07
TRAV16A0A0A6YYK6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TRAV16A0A0A6YYK6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV16A0A0A6YYK6 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC15.49■□□□□ 0.07
TRAV16A0A0A6YYK6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV16A0A0A6YYK6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV16A0A0A6YYK6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRAV16A0A0A6YYK6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV16A0A0A6YYK6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV16A0A0A6YYK6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV16A0A0A6YYK6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV16A0A0A6YYK6 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV16A0A0A6YYK6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV16A0A0A6YYK6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV16A0A0A6YYK6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TRAV16A0A0A6YYK6 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV16A0A0A6YYK6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV16A0A0A6YYK6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV16A0A0A6YYK6 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV16A0A0A6YYK6 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV16A0A0A6YYK6 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV16A0A0A6YYK6 ATP5G2P3-201ENST00000429083 425 ntBASIC15.48■□□□□ 0.07
TRAV16A0A0A6YYK6 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC15.48■□□□□ 0.07
TRAV16A0A0A6YYK6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TRAV16A0A0A6YYK6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV16A0A0A6YYK6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRAV16A0A0A6YYK6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV16A0A0A6YYK6 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV16A0A0A6YYK6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
TRAV16A0A0A6YYK6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV16A0A0A6YYK6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV16A0A0A6YYK6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV16A0A0A6YYK6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV16A0A0A6YYK6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV16A0A0A6YYK6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
TRAV16A0A0A6YYK6 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV16A0A0A6YYK6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV16A0A0A6YYK6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms