Protein–RNA interactions for Protein: A0A0A6YYJ0

MSANTD3-TMEFF1, Protein MSANTD3-TMEFF1, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-TMEFF1A0A0A6YYJ0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.33■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 ID1-201ENST00000376105 1233 ntBASIC22.32■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.32■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.32■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.32■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.32■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.32■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.31■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.31■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.31■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.3■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 AC135731.1-201ENST00000569415 2548 ntBASIC22.29■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 LINC02228-203ENST00000641970 1355 ntBASIC22.29■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.29■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.29■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 TERF1P2-201ENST00000583350 1212 ntBASIC22.29■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 AL499627.2-201ENST00000606283 725 ntBASIC22.29■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.28■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.28■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.28■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.27■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
MSANTD3-TMEFF1A0A0A6YYJ0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.27■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.26■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.26■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.26■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.26■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.26■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.25■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.25■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.24■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 OR2I1P-207ENST00000453522 948 ntBASIC22.24■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.24■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.24■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.24■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.24■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MSANTD3-TMEFF1A0A0A6YYJ0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms