Protein–RNA interactions for Protein: V9GX31

Gm12728, Peptidyl-prolyl cis-trans isomerase, mousemouse

Predictions only

Length 77 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12728V9GX31 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm12728V9GX31 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gm12728V9GX31 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gm12728V9GX31 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm12728V9GX31 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Gm12728V9GX31 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm12728V9GX31 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.66■□□□□ 0.9
Gm12728V9GX31 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gm12728V9GX31 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Gm12728V9GX31 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Gm12728V9GX31 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Gm12728V9GX31 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm12728V9GX31 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gm12728V9GX31 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.62■□□□□ 0.89
Gm12728V9GX31 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm12728V9GX31 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm12728V9GX31 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm12728V9GX31 Mipep-204ENSMUST00000225043 1548 ntBASIC20.6■□□□□ 0.89
Gm12728V9GX31 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.59■□□□□ 0.89
Gm12728V9GX31 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm12728V9GX31 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm12728V9GX31 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm12728V9GX31 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm12728V9GX31 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm12728V9GX31 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Gm12728V9GX31 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Gm12728V9GX31 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm12728V9GX31 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm12728V9GX31 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.51■□□□□ 0.87
Gm12728V9GX31 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm12728V9GX31 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm12728V9GX31 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm12728V9GX31 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.48■□□□□ 0.87
Gm12728V9GX31 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Gm12728V9GX31 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm12728V9GX31 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm12728V9GX31 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm12728V9GX31 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gm12728V9GX31 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm12728V9GX31 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm12728V9GX31 Gm25262-201ENSMUST00000174934 133 ntBASIC20.42■□□□□ 0.86
Gm12728V9GX31 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm12728V9GX31 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.41■□□□□ 0.86
Gm12728V9GX31 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm12728V9GX31 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Gm12728V9GX31 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm12728V9GX31 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm12728V9GX31 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Gm12728V9GX31 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.37■□□□□ 0.85
Gm12728V9GX31 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gm12728V9GX31 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm12728V9GX31 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.34■□□□□ 0.85
Gm12728V9GX31 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Gm12728V9GX31 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm12728V9GX31 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm12728V9GX31 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Gm12728V9GX31 Zxda-201ENSMUST00000117281 2621 ntBASIC20.33■□□□□ 0.84
Gm12728V9GX31 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
Gm12728V9GX31 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm12728V9GX31 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gm12728V9GX31 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm12728V9GX31 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm12728V9GX31 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Gm12728V9GX31 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm12728V9GX31 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm12728V9GX31 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.23■□□□□ 0.83
Gm12728V9GX31 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm12728V9GX31 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm12728V9GX31 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm12728V9GX31 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.22■□□□□ 0.83
Gm12728V9GX31 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm12728V9GX31 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm12728V9GX31 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Gm12728V9GX31 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm12728V9GX31 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm12728V9GX31 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.18■□□□□ 0.82
Gm12728V9GX31 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm12728V9GX31 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm12728V9GX31 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm12728V9GX31 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm12728V9GX31 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm12728V9GX31 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.15■□□□□ 0.82
Gm12728V9GX31 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm12728V9GX31 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
Gm12728V9GX31 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm12728V9GX31 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Gm12728V9GX31 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Gm12728V9GX31 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Gm12728V9GX31 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm12728V9GX31 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm12728V9GX31 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm12728V9GX31 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Gm12728V9GX31 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm12728V9GX31 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Gm12728V9GX31 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm12728V9GX31 Gm27322-201ENSMUST00000184007 104 ntBASIC20.09■□□□□ 0.81
Gm12728V9GX31 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm12728V9GX31 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm12728V9GX31 Amer2-203ENSMUST00000225247 2662 ntBASIC20.08■□□□□ 0.81
Gm12728V9GX31 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms