Protein–RNA interactions for Protein: Q91Y04

Pcdhb15, Protocadherin beta 15, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb15Q91Y04 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC29.54■■■□□ 2.32
Pcdhb15Q91Y04 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Pcdhb15Q91Y04 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Pcdhb15Q91Y04 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC29.53■■■□□ 2.32
Pcdhb15Q91Y04 AL845457.1-201ENSMUST00000197244 68 ntBASIC29.53■■■□□ 2.32
Pcdhb15Q91Y04 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Pcdhb15Q91Y04 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29.51■■■□□ 2.31
Pcdhb15Q91Y04 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Pcdhb15Q91Y04 Mipep-204ENSMUST00000225043 1548 ntBASIC29.48■■■□□ 2.31
Pcdhb15Q91Y04 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
Pcdhb15Q91Y04 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC29.47■■■□□ 2.31
Pcdhb15Q91Y04 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Pcdhb15Q91Y04 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
Pcdhb15Q91Y04 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
Pcdhb15Q91Y04 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC29.4■■■□□ 2.3
Pcdhb15Q91Y04 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC29.39■■■□□ 2.3
Pcdhb15Q91Y04 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
Pcdhb15Q91Y04 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Pcdhb15Q91Y04 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Pcdhb15Q91Y04 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Pcdhb15Q91Y04 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC29.35■■■□□ 2.29
Pcdhb15Q91Y04 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Pcdhb15Q91Y04 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Pcdhb15Q91Y04 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
Pcdhb15Q91Y04 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC29.34■■■□□ 2.29
Pcdhb15Q91Y04 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Pcdhb15Q91Y04 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Pcdhb15Q91Y04 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Pcdhb15Q91Y04 Gm25262-201ENSMUST00000174934 133 ntBASIC29.29■■■□□ 2.28
Pcdhb15Q91Y04 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Pcdhb15Q91Y04 Gm6206-201ENSMUST00000133472 2199 ntBASIC29.23■■■□□ 2.27
Pcdhb15Q91Y04 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Pcdhb15Q91Y04 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29.19■■■□□ 2.26
Pcdhb15Q91Y04 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Pcdhb15Q91Y04 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC29.16■■■□□ 2.26
Pcdhb15Q91Y04 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Pcdhb15Q91Y04 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Pcdhb15Q91Y04 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Pcdhb15Q91Y04 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Pcdhb15Q91Y04 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Pcdhb15Q91Y04 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Pcdhb15Q91Y04 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC29.1■■■□□ 2.25
Pcdhb15Q91Y04 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Pcdhb15Q91Y04 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC29.09■■■□□ 2.25
Pcdhb15Q91Y04 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Pcdhb15Q91Y04 Zxda-201ENSMUST00000117281 2621 ntBASIC29.08■■■□□ 2.25
Pcdhb15Q91Y04 Gm9905-201ENSMUST00000065740 1845 ntBASIC29.08■■■□□ 2.25
Pcdhb15Q91Y04 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC29.06■■■□□ 2.24
Pcdhb15Q91Y04 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC29.05■■■□□ 2.24
Pcdhb15Q91Y04 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Pcdhb15Q91Y04 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Pcdhb15Q91Y04 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC29.03■■■□□ 2.24
Pcdhb15Q91Y04 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC28.99■■■□□ 2.23
Pcdhb15Q91Y04 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.98■■■□□ 2.23
Pcdhb15Q91Y04 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.97■■■□□ 2.23
Pcdhb15Q91Y04 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC28.97■■■□□ 2.23
Pcdhb15Q91Y04 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28.96■■■□□ 2.23
Pcdhb15Q91Y04 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.23
Pcdhb15Q91Y04 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC28.94■■■□□ 2.22
Pcdhb15Q91Y04 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Pcdhb15Q91Y04 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Pcdhb15Q91Y04 Gm43445-201ENSMUST00000198564 2091 ntBASIC28.93■■■□□ 2.22
Pcdhb15Q91Y04 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Pcdhb15Q91Y04 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Pcdhb15Q91Y04 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.89■■■□□ 2.21
Pcdhb15Q91Y04 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Pcdhb15Q91Y04 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.86■■■□□ 2.21
Pcdhb15Q91Y04 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC28.86■■■□□ 2.21
Pcdhb15Q91Y04 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Pcdhb15Q91Y04 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
Pcdhb15Q91Y04 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Pcdhb15Q91Y04 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.83■■■□□ 2.21
Pcdhb15Q91Y04 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Pcdhb15Q91Y04 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Pcdhb15Q91Y04 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Pcdhb15Q91Y04 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Pcdhb15Q91Y04 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC28.8■■■□□ 2.2
Pcdhb15Q91Y04 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
Pcdhb15Q91Y04 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Pcdhb15Q91Y04 AC166822.3-201ENSMUST00000227394 661 ntBASIC28.8■■■□□ 2.2
Pcdhb15Q91Y04 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Pcdhb15Q91Y04 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.79■■■□□ 2.2
Pcdhb15Q91Y04 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Pcdhb15Q91Y04 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Pcdhb15Q91Y04 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Pcdhb15Q91Y04 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
Pcdhb15Q91Y04 Gm27322-201ENSMUST00000184007 104 ntBASIC28.75■■■□□ 2.19
Pcdhb15Q91Y04 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Pcdhb15Q91Y04 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Pcdhb15Q91Y04 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Pcdhb15Q91Y04 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Pcdhb15Q91Y04 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Pcdhb15Q91Y04 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
Pcdhb15Q91Y04 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Pcdhb15Q91Y04 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Pcdhb15Q91Y04 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Pcdhb15Q91Y04 Amer2-203ENSMUST00000225247 2662 ntBASIC28.67■■■□□ 2.18
Pcdhb15Q91Y04 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Pcdhb15Q91Y04 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
Pcdhb15Q91Y04 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms