Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.79■■□□□ 1.72
Pcdhb4Q91XZ6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Pcdhb4Q91XZ6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.76■■□□□ 1.71
Pcdhb4Q91XZ6 Mipep-204ENSMUST00000225043 1548 ntBASIC25.75■■□□□ 1.71
Pcdhb4Q91XZ6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdhb4Q91XZ6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdhb4Q91XZ6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdhb4Q91XZ6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdhb4Q91XZ6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
Pcdhb4Q91XZ6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Pcdhb4Q91XZ6 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.71■■□□□ 1.71
Pcdhb4Q91XZ6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdhb4Q91XZ6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdhb4Q91XZ6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdhb4Q91XZ6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.65■■□□□ 1.7
Pcdhb4Q91XZ6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhb4Q91XZ6 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.62■■□□□ 1.69
Pcdhb4Q91XZ6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.62■■□□□ 1.69
Pcdhb4Q91XZ6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdhb4Q91XZ6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.61■■□□□ 1.69
Pcdhb4Q91XZ6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdhb4Q91XZ6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
Pcdhb4Q91XZ6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
Pcdhb4Q91XZ6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
Pcdhb4Q91XZ6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
Pcdhb4Q91XZ6 Gm27322-201ENSMUST00000184007 104 ntBASIC25.57■■□□□ 1.68
Pcdhb4Q91XZ6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdhb4Q91XZ6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdhb4Q91XZ6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdhb4Q91XZ6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.54■■□□□ 1.68
Pcdhb4Q91XZ6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdhb4Q91XZ6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
Pcdhb4Q91XZ6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.53■■□□□ 1.68
Pcdhb4Q91XZ6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.52■■□□□ 1.68
Pcdhb4Q91XZ6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhb4Q91XZ6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
Pcdhb4Q91XZ6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Pcdhb4Q91XZ6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Pcdhb4Q91XZ6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Pcdhb4Q91XZ6 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.44■■□□□ 1.66
Pcdhb4Q91XZ6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Pcdhb4Q91XZ6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Pcdhb4Q91XZ6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhb4Q91XZ6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhb4Q91XZ6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Pcdhb4Q91XZ6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Pcdhb4Q91XZ6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Pcdhb4Q91XZ6 Gm26115-201ENSMUST00000175605 87 ntBASIC25.35■■□□□ 1.65
Pcdhb4Q91XZ6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdhb4Q91XZ6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdhb4Q91XZ6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdhb4Q91XZ6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
Pcdhb4Q91XZ6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Pcdhb4Q91XZ6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdhb4Q91XZ6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdhb4Q91XZ6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdhb4Q91XZ6 Gm8109-201ENSMUST00000194076 746 ntBASIC25.3■■□□□ 1.64
Pcdhb4Q91XZ6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdhb4Q91XZ6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdhb4Q91XZ6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
Pcdhb4Q91XZ6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdhb4Q91XZ6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
Pcdhb4Q91XZ6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdhb4Q91XZ6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdhb4Q91XZ6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdhb4Q91XZ6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.23■■□□□ 1.63
Pcdhb4Q91XZ6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhb4Q91XZ6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.23■■□□□ 1.63
Pcdhb4Q91XZ6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdhb4Q91XZ6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdhb4Q91XZ6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdhb4Q91XZ6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdhb4Q91XZ6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Pcdhb4Q91XZ6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhb4Q91XZ6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdhb4Q91XZ6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdhb4Q91XZ6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdhb4Q91XZ6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdhb4Q91XZ6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdhb4Q91XZ6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdhb4Q91XZ6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
Pcdhb4Q91XZ6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdhb4Q91XZ6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdhb4Q91XZ6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdhb4Q91XZ6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdhb4Q91XZ6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdhb4Q91XZ6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhb4Q91XZ6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhb4Q91XZ6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhb4Q91XZ6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Pcdhb4Q91XZ6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhb4Q91XZ6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcdhb4Q91XZ6 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.04■■□□□ 1.6
Pcdhb4Q91XZ6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdhb4Q91XZ6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhb4Q91XZ6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhb4Q91XZ6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhb4Q91XZ6 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.02■■□□□ 1.6
Pcdhb4Q91XZ6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhb4Q91XZ6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 140.4 ms