Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdhga11Q91XY8 Mipep-204ENSMUST00000225043 1548 ntBASIC25.11■■□□□ 1.61
Pcdhga11Q91XY8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdhga11Q91XY8 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.08■■□□□ 1.61
Pcdhga11Q91XY8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhga11Q91XY8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.04■■□□□ 1.6
Pcdhga11Q91XY8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhga11Q91XY8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.01■■□□□ 1.59
Pcdhga11Q91XY8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.99■■□□□ 1.59
Pcdhga11Q91XY8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdhga11Q91XY8 Gm17082-201ENSMUST00000166043 1091 ntBASIC24.94■■□□□ 1.58
Pcdhga11Q91XY8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhga11Q91XY8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhga11Q91XY8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhga11Q91XY8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
Pcdhga11Q91XY8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhga11Q91XY8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhga11Q91XY8 Gm27322-201ENSMUST00000184007 104 ntBASIC24.91■■□□□ 1.58
Pcdhga11Q91XY8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
Pcdhga11Q91XY8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhga11Q91XY8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
Pcdhga11Q91XY8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdhga11Q91XY8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.86■■□□□ 1.57
Pcdhga11Q91XY8 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.83■■□□□ 1.57
Pcdhga11Q91XY8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Pcdhga11Q91XY8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdhga11Q91XY8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhga11Q91XY8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhga11Q91XY8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhga11Q91XY8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
Pcdhga11Q91XY8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
Pcdhga11Q91XY8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhga11Q91XY8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhga11Q91XY8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.54
Pcdhga11Q91XY8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhga11Q91XY8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhga11Q91XY8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
Pcdhga11Q91XY8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhga11Q91XY8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhga11Q91XY8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhga11Q91XY8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Pcdhga11Q91XY8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Pcdhga11Q91XY8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Pcdhga11Q91XY8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.64■■□□□ 1.53
Pcdhga11Q91XY8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.63■■□□□ 1.53
Pcdhga11Q91XY8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhga11Q91XY8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdhga11Q91XY8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdhga11Q91XY8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhga11Q91XY8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhga11Q91XY8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.61■■□□□ 1.53
Pcdhga11Q91XY8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhga11Q91XY8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhga11Q91XY8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhga11Q91XY8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.52
Pcdhga11Q91XY8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.52
Pcdhga11Q91XY8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Pcdhga11Q91XY8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhga11Q91XY8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhga11Q91XY8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdhga11Q91XY8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdhga11Q91XY8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdhga11Q91XY8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdhga11Q91XY8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhga11Q91XY8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhga11Q91XY8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhga11Q91XY8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdhga11Q91XY8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhga11Q91XY8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhga11Q91XY8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdhga11Q91XY8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdhga11Q91XY8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdhga11Q91XY8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.44■■□□□ 1.5
Pcdhga11Q91XY8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.44■■□□□ 1.5
Pcdhga11Q91XY8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhga11Q91XY8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Pcdhga11Q91XY8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhga11Q91XY8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhga11Q91XY8 Gm24804-201ENSMUST00000174982 85 ntBASIC24.41■■□□□ 1.5
Pcdhga11Q91XY8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.41■■□□□ 1.5
Pcdhga11Q91XY8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdhga11Q91XY8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdhga11Q91XY8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Pcdhga11Q91XY8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.39■■□□□ 1.49
Pcdhga11Q91XY8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhga11Q91XY8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhga11Q91XY8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhga11Q91XY8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhga11Q91XY8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhga11Q91XY8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhga11Q91XY8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhga11Q91XY8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Pcdhga11Q91XY8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.3■■□□□ 1.48
Pcdhga11Q91XY8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhga11Q91XY8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhga11Q91XY8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.29■■□□□ 1.48
Pcdhga11Q91XY8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Pcdhga11Q91XY8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.26■■□□□ 1.47
Pcdhga11Q91XY8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhga11Q91XY8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms