Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdhga11Q91XY8 Mipep-204ENSMUST00000225043 1548 ntBASIC25.11■■□□□ 1.61
Pcdhga11Q91XY8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdhga11Q91XY8 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.08■■□□□ 1.61
Pcdhga11Q91XY8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhga11Q91XY8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.04■■□□□ 1.6
Pcdhga11Q91XY8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhga11Q91XY8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.01■■□□□ 1.59
Pcdhga11Q91XY8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.99■■□□□ 1.59
Pcdhga11Q91XY8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdhga11Q91XY8 Gm17082-201ENSMUST00000166043 1091 ntBASIC24.94■■□□□ 1.58
Pcdhga11Q91XY8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhga11Q91XY8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhga11Q91XY8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhga11Q91XY8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
Pcdhga11Q91XY8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhga11Q91XY8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhga11Q91XY8 Gm27322-201ENSMUST00000184007 104 ntBASIC24.91■■□□□ 1.58
Pcdhga11Q91XY8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
Pcdhga11Q91XY8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhga11Q91XY8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
Pcdhga11Q91XY8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdhga11Q91XY8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.86■■□□□ 1.57
Pcdhga11Q91XY8 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.83■■□□□ 1.57
Pcdhga11Q91XY8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Pcdhga11Q91XY8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdhga11Q91XY8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhga11Q91XY8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhga11Q91XY8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhga11Q91XY8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
Pcdhga11Q91XY8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
Pcdhga11Q91XY8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhga11Q91XY8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhga11Q91XY8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.54
Pcdhga11Q91XY8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhga11Q91XY8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhga11Q91XY8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
Pcdhga11Q91XY8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhga11Q91XY8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhga11Q91XY8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhga11Q91XY8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Pcdhga11Q91XY8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Pcdhga11Q91XY8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Pcdhga11Q91XY8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.64■■□□□ 1.53
Pcdhga11Q91XY8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.63■■□□□ 1.53
Pcdhga11Q91XY8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhga11Q91XY8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdhga11Q91XY8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdhga11Q91XY8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhga11Q91XY8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhga11Q91XY8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.61■■□□□ 1.53
Pcdhga11Q91XY8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhga11Q91XY8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhga11Q91XY8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhga11Q91XY8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.52
Pcdhga11Q91XY8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.52
Pcdhga11Q91XY8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Pcdhga11Q91XY8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhga11Q91XY8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhga11Q91XY8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdhga11Q91XY8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdhga11Q91XY8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdhga11Q91XY8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdhga11Q91XY8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhga11Q91XY8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhga11Q91XY8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhga11Q91XY8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdhga11Q91XY8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhga11Q91XY8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhga11Q91XY8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdhga11Q91XY8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdhga11Q91XY8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdhga11Q91XY8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.44■■□□□ 1.5
Pcdhga11Q91XY8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.44■■□□□ 1.5
Pcdhga11Q91XY8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhga11Q91XY8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Pcdhga11Q91XY8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhga11Q91XY8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhga11Q91XY8 Gm24804-201ENSMUST00000174982 85 ntBASIC24.41■■□□□ 1.5
Pcdhga11Q91XY8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.41■■□□□ 1.5
Pcdhga11Q91XY8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdhga11Q91XY8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdhga11Q91XY8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Pcdhga11Q91XY8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.39■■□□□ 1.49
Pcdhga11Q91XY8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhga11Q91XY8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhga11Q91XY8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhga11Q91XY8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhga11Q91XY8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhga11Q91XY8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhga11Q91XY8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhga11Q91XY8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Pcdhga11Q91XY8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.3■■□□□ 1.48
Pcdhga11Q91XY8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhga11Q91XY8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhga11Q91XY8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.29■■□□□ 1.48
Pcdhga11Q91XY8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Pcdhga11Q91XY8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.26■■□□□ 1.47
Pcdhga11Q91XY8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhga11Q91XY8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms