Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.94■■□□□ 1.74
Pcdhga9Q91XX9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Pcdhga9Q91XX9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.93■■□□□ 1.74
Pcdhga9Q91XX9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Pcdhga9Q91XX9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Pcdhga9Q91XX9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Pcdhga9Q91XX9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Pcdhga9Q91XX9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Pcdhga9Q91XX9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Pcdhga9Q91XX9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Pcdhga9Q91XX9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Pcdhga9Q91XX9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Pcdhga9Q91XX9 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.85■■□□□ 1.73
Pcdhga9Q91XX9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Pcdhga9Q91XX9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Pcdhga9Q91XX9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Pcdhga9Q91XX9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
Pcdhga9Q91XX9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Pcdhga9Q91XX9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Pcdhga9Q91XX9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Pcdhga9Q91XX9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Pcdhga9Q91XX9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Pcdhga9Q91XX9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.75■■□□□ 1.71
Pcdhga9Q91XX9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
Pcdhga9Q91XX9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdhga9Q91XX9 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.69■■□□□ 1.7
Pcdhga9Q91XX9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdhga9Q91XX9 Zfp131-205ENSMUST00000223812 663 ntBASIC25.67■■□□□ 1.7
Pcdhga9Q91XX9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdhga9Q91XX9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdhga9Q91XX9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pcdhga9Q91XX9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhga9Q91XX9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhga9Q91XX9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhga9Q91XX9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhga9Q91XX9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
Pcdhga9Q91XX9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdhga9Q91XX9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.59■■□□□ 1.69
Pcdhga9Q91XX9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdhga9Q91XX9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdhga9Q91XX9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdhga9Q91XX9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdhga9Q91XX9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdhga9Q91XX9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdhga9Q91XX9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdhga9Q91XX9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdhga9Q91XX9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdhga9Q91XX9 Peli2-204ENSMUST00000226513 1320 ntBASIC25.51■■□□□ 1.67
Pcdhga9Q91XX9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
Pcdhga9Q91XX9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Pcdhga9Q91XX9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pcdhga9Q91XX9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
Pcdhga9Q91XX9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.47■■□□□ 1.67
Pcdhga9Q91XX9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Pcdhga9Q91XX9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Pcdhga9Q91XX9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Pcdhga9Q91XX9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.45■■□□□ 1.66
Pcdhga9Q91XX9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
Pcdhga9Q91XX9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
Pcdhga9Q91XX9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Pcdhga9Q91XX9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.43■■□□□ 1.66
Pcdhga9Q91XX9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Pcdhga9Q91XX9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
Pcdhga9Q91XX9 Gm16148-201ENSMUST00000119653 893 ntBASIC25.41■■□□□ 1.66
Pcdhga9Q91XX9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Pcdhga9Q91XX9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.4■■□□□ 1.66
Pcdhga9Q91XX9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Pcdhga9Q91XX9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Pcdhga9Q91XX9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Pcdhga9Q91XX9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
Pcdhga9Q91XX9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
Pcdhga9Q91XX9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Pcdhga9Q91XX9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhga9Q91XX9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhga9Q91XX9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.27■■□□□ 1.64
Pcdhga9Q91XX9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhga9Q91XX9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.26■■□□□ 1.63
Pcdhga9Q91XX9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdhga9Q91XX9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdhga9Q91XX9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdhga9Q91XX9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdhga9Q91XX9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
Pcdhga9Q91XX9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
Pcdhga9Q91XX9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhga9Q91XX9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Pcdhga9Q91XX9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.21■■□□□ 1.63
Pcdhga9Q91XX9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdhga9Q91XX9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Pcdhga9Q91XX9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhga9Q91XX9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Pcdhga9Q91XX9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhga9Q91XX9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdhga9Q91XX9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdhga9Q91XX9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdhga9Q91XX9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.17■■□□□ 1.62
Pcdhga9Q91XX9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhga9Q91XX9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.16■■□□□ 1.62
Pcdhga9Q91XX9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhga9Q91XX9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhga9Q91XX9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.15■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms