Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Rnf8Q8VC56 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.77■■□□□ 1.56
Rnf8Q8VC56 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Rnf8Q8VC56 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rnf8Q8VC56 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rnf8Q8VC56 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rnf8Q8VC56 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Rnf8Q8VC56 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.72■■□□□ 1.55
Rnf8Q8VC56 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rnf8Q8VC56 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Rnf8Q8VC56 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
Rnf8Q8VC56 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Rnf8Q8VC56 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Rnf8Q8VC56 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Rnf8Q8VC56 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
Rnf8Q8VC56 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rnf8Q8VC56 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Rnf8Q8VC56 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rnf8Q8VC56 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.59■■□□□ 1.53
Rnf8Q8VC56 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Rnf8Q8VC56 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Rnf8Q8VC56 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Rnf8Q8VC56 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Rnf8Q8VC56 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Rnf8Q8VC56 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.54■■□□□ 1.52
Rnf8Q8VC56 Mipep-204ENSMUST00000225043 1548 ntBASIC24.53■■□□□ 1.52
Rnf8Q8VC56 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rnf8Q8VC56 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rnf8Q8VC56 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rnf8Q8VC56 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rnf8Q8VC56 Zxda-201ENSMUST00000117281 2621 ntBASIC24.47■■□□□ 1.51
Rnf8Q8VC56 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.46■■□□□ 1.51
Rnf8Q8VC56 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Rnf8Q8VC56 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Rnf8Q8VC56 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rnf8Q8VC56 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.44■■□□□ 1.5
Rnf8Q8VC56 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rnf8Q8VC56 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rnf8Q8VC56 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rnf8Q8VC56 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Rnf8Q8VC56 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Rnf8Q8VC56 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rnf8Q8VC56 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.37■■□□□ 1.49
Rnf8Q8VC56 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rnf8Q8VC56 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Rnf8Q8VC56 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rnf8Q8VC56 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.34■■□□□ 1.49
Rnf8Q8VC56 Gm24804-201ENSMUST00000174982 85 ntBASIC24.34■■□□□ 1.49
Rnf8Q8VC56 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rnf8Q8VC56 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rnf8Q8VC56 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rnf8Q8VC56 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rnf8Q8VC56 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rnf8Q8VC56 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Rnf8Q8VC56 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rnf8Q8VC56 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rnf8Q8VC56 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rnf8Q8VC56 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Rnf8Q8VC56 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.3■■□□□ 1.48
Rnf8Q8VC56 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Rnf8Q8VC56 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Rnf8Q8VC56 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rnf8Q8VC56 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rnf8Q8VC56 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rnf8Q8VC56 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rnf8Q8VC56 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rnf8Q8VC56 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Rnf8Q8VC56 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rnf8Q8VC56 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rnf8Q8VC56 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.2■■□□□ 1.47
Rnf8Q8VC56 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
Rnf8Q8VC56 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Rnf8Q8VC56 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rnf8Q8VC56 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.18■■□□□ 1.46
Rnf8Q8VC56 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rnf8Q8VC56 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rnf8Q8VC56 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.16■■□□□ 1.46
Rnf8Q8VC56 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rnf8Q8VC56 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Rnf8Q8VC56 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Rnf8Q8VC56 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rnf8Q8VC56 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.13■■□□□ 1.45
Rnf8Q8VC56 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rnf8Q8VC56 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Rnf8Q8VC56 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rnf8Q8VC56 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Rnf8Q8VC56 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.09■■□□□ 1.45
Rnf8Q8VC56 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Rnf8Q8VC56 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Rnf8Q8VC56 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Rnf8Q8VC56 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Rnf8Q8VC56 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rnf8Q8VC56 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Rnf8Q8VC56 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Rnf8Q8VC56 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rnf8Q8VC56 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Rnf8Q8VC56 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rnf8Q8VC56 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rnf8Q8VC56 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Rnf8Q8VC56 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms