Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
Ubqln1Q8R317 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Ubqln1Q8R317 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ubqln1Q8R317 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.69■■□□□ 1.54
Ubqln1Q8R317 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ubqln1Q8R317 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Ubqln1Q8R317 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Ubqln1Q8R317 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Ubqln1Q8R317 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ubqln1Q8R317 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
Ubqln1Q8R317 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ubqln1Q8R317 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Ubqln1Q8R317 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.53■■□□□ 1.52
Ubqln1Q8R317 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ubqln1Q8R317 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ubqln1Q8R317 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ubqln1Q8R317 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ubqln1Q8R317 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Ubqln1Q8R317 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ubqln1Q8R317 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ubqln1Q8R317 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ubqln1Q8R317 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ubqln1Q8R317 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
Ubqln1Q8R317 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ubqln1Q8R317 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Ubqln1Q8R317 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ubqln1Q8R317 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.41■■□□□ 1.5
Ubqln1Q8R317 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ubqln1Q8R317 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ubqln1Q8R317 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.4■■□□□ 1.5
Ubqln1Q8R317 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ubqln1Q8R317 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Ubqln1Q8R317 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ubqln1Q8R317 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ubqln1Q8R317 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ubqln1Q8R317 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Ubqln1Q8R317 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ubqln1Q8R317 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Ubqln1Q8R317 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Ubqln1Q8R317 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ubqln1Q8R317 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ubqln1Q8R317 Gm24804-201ENSMUST00000174982 85 ntBASIC24.31■■□□□ 1.48
Ubqln1Q8R317 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ubqln1Q8R317 Peli2-204ENSMUST00000226513 1320 ntBASIC24.3■■□□□ 1.48
Ubqln1Q8R317 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Ubqln1Q8R317 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.28■■□□□ 1.48
Ubqln1Q8R317 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ubqln1Q8R317 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ubqln1Q8R317 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ubqln1Q8R317 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
Ubqln1Q8R317 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ubqln1Q8R317 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.21■■□□□ 1.47
Ubqln1Q8R317 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Ubqln1Q8R317 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ubqln1Q8R317 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Ubqln1Q8R317 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ubqln1Q8R317 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ubqln1Q8R317 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ubqln1Q8R317 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ubqln1Q8R317 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Ubqln1Q8R317 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Ubqln1Q8R317 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ubqln1Q8R317 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
Ubqln1Q8R317 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Ubqln1Q8R317 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.12■■□□□ 1.45
Ubqln1Q8R317 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ubqln1Q8R317 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Ubqln1Q8R317 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.1■■□□□ 1.45
Ubqln1Q8R317 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
Ubqln1Q8R317 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.08■■□□□ 1.45
Ubqln1Q8R317 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Ubqln1Q8R317 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ubqln1Q8R317 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ubqln1Q8R317 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ubqln1Q8R317 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ubqln1Q8R317 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.05■■□□□ 1.44
Ubqln1Q8R317 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Ubqln1Q8R317 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Ubqln1Q8R317 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ubqln1Q8R317 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ubqln1Q8R317 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Ubqln1Q8R317 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Ubqln1Q8R317 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.03■■□□□ 1.44
Ubqln1Q8R317 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Ubqln1Q8R317 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Ubqln1Q8R317 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ubqln1Q8R317 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Ubqln1Q8R317 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
Ubqln1Q8R317 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Ubqln1Q8R317 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ubqln1Q8R317 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.99■■□□□ 1.43
Ubqln1Q8R317 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.99■■□□□ 1.43
Ubqln1Q8R317 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ubqln1Q8R317 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Ubqln1Q8R317 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ubqln1Q8R317 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.98■■□□□ 1.43
Ubqln1Q8R317 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.98■■□□□ 1.43
Ubqln1Q8R317 Gm16148-201ENSMUST00000119653 893 ntBASIC23.97■■□□□ 1.43
Ubqln1Q8R317 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.97■■□□□ 1.43
Ubqln1Q8R317 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms