Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Lin9Q8C735 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Lin9Q8C735 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Lin9Q8C735 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Lin9Q8C735 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Lin9Q8C735 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Lin9Q8C735 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Lin9Q8C735 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Lin9Q8C735 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Lin9Q8C735 Mipep-204ENSMUST00000225043 1548 ntBASIC28.47■■■□□ 2.15
Lin9Q8C735 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Lin9Q8C735 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Lin9Q8C735 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Lin9Q8C735 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.44■■■□□ 2.14
Lin9Q8C735 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.44■■■□□ 2.14
Lin9Q8C735 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.41■■■□□ 2.14
Lin9Q8C735 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.14
Lin9Q8C735 Zfp131-205ENSMUST00000223812 663 ntBASIC28.38■■■□□ 2.13
Lin9Q8C735 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
Lin9Q8C735 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
Lin9Q8C735 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Lin9Q8C735 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.28■■■□□ 2.12
Lin9Q8C735 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Lin9Q8C735 Gm6658-202ENSMUST00000209493 1885 ntBASIC28.26■■■□□ 2.11
Lin9Q8C735 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Lin9Q8C735 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Lin9Q8C735 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
Lin9Q8C735 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Lin9Q8C735 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Lin9Q8C735 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
Lin9Q8C735 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Lin9Q8C735 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28.15■■■□□ 2.1
Lin9Q8C735 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.14■■■□□ 2.09
Lin9Q8C735 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Lin9Q8C735 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Lin9Q8C735 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Lin9Q8C735 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Lin9Q8C735 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Lin9Q8C735 Gm16148-201ENSMUST00000119653 893 ntBASIC28.08■■■□□ 2.09
Lin9Q8C735 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Lin9Q8C735 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
Lin9Q8C735 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Lin9Q8C735 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Lin9Q8C735 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28.07■■■□□ 2.08
Lin9Q8C735 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Lin9Q8C735 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
Lin9Q8C735 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Lin9Q8C735 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Lin9Q8C735 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Lin9Q8C735 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Lin9Q8C735 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Lin9Q8C735 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Lin9Q8C735 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC27.98■■■□□ 2.07
Lin9Q8C735 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
Lin9Q8C735 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.06
Lin9Q8C735 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Lin9Q8C735 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC27.92■■■□□ 2.06
Lin9Q8C735 Peli2-204ENSMUST00000226513 1320 ntBASIC27.92■■■□□ 2.06
Lin9Q8C735 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27.88■■■□□ 2.05
Lin9Q8C735 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.88■■■□□ 2.05
Lin9Q8C735 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Lin9Q8C735 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Lin9Q8C735 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Lin9Q8C735 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Lin9Q8C735 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Lin9Q8C735 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Lin9Q8C735 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Lin9Q8C735 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Lin9Q8C735 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Lin9Q8C735 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC27.83■■■□□ 2.05
Lin9Q8C735 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Lin9Q8C735 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.83■■■□□ 2.05
Lin9Q8C735 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Lin9Q8C735 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27.81■■■□□ 2.04
Lin9Q8C735 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27.81■■■□□ 2.04
Lin9Q8C735 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Lin9Q8C735 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Lin9Q8C735 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.79■■■□□ 2.04
Lin9Q8C735 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC27.78■■■□□ 2.04
Lin9Q8C735 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Lin9Q8C735 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Lin9Q8C735 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.75■■■□□ 2.03
Lin9Q8C735 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Lin9Q8C735 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
Lin9Q8C735 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Lin9Q8C735 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27.74■■■□□ 2.03
Lin9Q8C735 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Lin9Q8C735 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Lin9Q8C735 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Lin9Q8C735 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
Lin9Q8C735 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Lin9Q8C735 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
Lin9Q8C735 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Lin9Q8C735 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27.69■■■□□ 2.02
Lin9Q8C735 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.69■■■□□ 2.02
Lin9Q8C735 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
Lin9Q8C735 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC27.67■■■□□ 2.02
Lin9Q8C735 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
Lin9Q8C735 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
Lin9Q8C735 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms