Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC33.75■■■□□ 2.99
Ccdc60Q8C4J0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC33.71■■■□□ 2.99
Ccdc60Q8C4J0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
Ccdc60Q8C4J0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC33.7■■■□□ 2.98
Ccdc60Q8C4J0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC33.69■■■□□ 2.98
Ccdc60Q8C4J0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
Ccdc60Q8C4J0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC33.66■■■□□ 2.98
Ccdc60Q8C4J0 Gm2415-204ENSMUST00000190235 2004 ntBASIC33.65■■■□□ 2.98
Ccdc60Q8C4J0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC33.63■■■□□ 2.97
Ccdc60Q8C4J0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC33.62■■■□□ 2.97
Ccdc60Q8C4J0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC33.61■■■□□ 2.97
Ccdc60Q8C4J0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
Ccdc60Q8C4J0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
Ccdc60Q8C4J0 Gm24804-201ENSMUST00000174982 85 ntBASIC33.54■■■□□ 2.96
Ccdc60Q8C4J0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
Ccdc60Q8C4J0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Ccdc60Q8C4J0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Ccdc60Q8C4J0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Ccdc60Q8C4J0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Ccdc60Q8C4J0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC33.46■■■□□ 2.95
Ccdc60Q8C4J0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC33.45■■■□□ 2.94
Ccdc60Q8C4J0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Ccdc60Q8C4J0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC33.43■■■□□ 2.94
Ccdc60Q8C4J0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Ccdc60Q8C4J0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Ccdc60Q8C4J0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC33.41■■■□□ 2.94
Ccdc60Q8C4J0 Gm6658-202ENSMUST00000209493 1885 ntBASIC33.39■■■□□ 2.94
Ccdc60Q8C4J0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
Ccdc60Q8C4J0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC33.36■■■□□ 2.93
Ccdc60Q8C4J0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
Ccdc60Q8C4J0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Ccdc60Q8C4J0 Peli2-204ENSMUST00000226513 1320 ntBASIC33.34■■■□□ 2.93
Ccdc60Q8C4J0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
Ccdc60Q8C4J0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
Ccdc60Q8C4J0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC33.32■■■□□ 2.92
Ccdc60Q8C4J0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
Ccdc60Q8C4J0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC33.31■■■□□ 2.92
Ccdc60Q8C4J0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
Ccdc60Q8C4J0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC33.29■■■□□ 2.92
Ccdc60Q8C4J0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC33.24■■■□□ 2.91
Ccdc60Q8C4J0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC33.23■■■□□ 2.91
Ccdc60Q8C4J0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC33.21■■■□□ 2.91
Ccdc60Q8C4J0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC33.2■■■□□ 2.91
Ccdc60Q8C4J0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
Ccdc60Q8C4J0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
Ccdc60Q8C4J0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
Ccdc60Q8C4J0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Ccdc60Q8C4J0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
Ccdc60Q8C4J0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC33.14■■■□□ 2.9
Ccdc60Q8C4J0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.89
Ccdc60Q8C4J0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC33.1■■■□□ 2.89
Ccdc60Q8C4J0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Ccdc60Q8C4J0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Ccdc60Q8C4J0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.89
Ccdc60Q8C4J0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC33.07■■■□□ 2.89
Ccdc60Q8C4J0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC33.07■■■□□ 2.88
Ccdc60Q8C4J0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC33.04■■■□□ 2.88
Ccdc60Q8C4J0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
Ccdc60Q8C4J0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC33.04■■■□□ 2.88
Ccdc60Q8C4J0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Ccdc60Q8C4J0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC33■■■□□ 2.87
Ccdc60Q8C4J0 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Ccdc60Q8C4J0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
Ccdc60Q8C4J0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Ccdc60Q8C4J0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
Ccdc60Q8C4J0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
Ccdc60Q8C4J0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC32.94■■■□□ 2.86
Ccdc60Q8C4J0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC32.94■■■□□ 2.86
Ccdc60Q8C4J0 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC32.94■■■□□ 2.86
Ccdc60Q8C4J0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Ccdc60Q8C4J0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
Ccdc60Q8C4J0 Gm16148-201ENSMUST00000119653 893 ntBASIC32.91■■■□□ 2.86
Ccdc60Q8C4J0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Ccdc60Q8C4J0 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC32.89■■■□□ 2.86
Ccdc60Q8C4J0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC32.89■■■□□ 2.86
Ccdc60Q8C4J0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Ccdc60Q8C4J0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
Ccdc60Q8C4J0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Ccdc60Q8C4J0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
Ccdc60Q8C4J0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC32.82■■■□□ 2.85
Ccdc60Q8C4J0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC32.82■■■□□ 2.84
Ccdc60Q8C4J0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC32.81■■■□□ 2.84
Ccdc60Q8C4J0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
Ccdc60Q8C4J0 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC32.81■■■□□ 2.84
Ccdc60Q8C4J0 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Ccdc60Q8C4J0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
Ccdc60Q8C4J0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC32.77■■■□□ 2.84
Ccdc60Q8C4J0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
Ccdc60Q8C4J0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Ccdc60Q8C4J0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Ccdc60Q8C4J0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
Ccdc60Q8C4J0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC32.74■■■□□ 2.83
Ccdc60Q8C4J0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Ccdc60Q8C4J0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Ccdc60Q8C4J0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC32.71■■■□□ 2.83
Ccdc60Q8C4J0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC32.71■■■□□ 2.83
Ccdc60Q8C4J0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC32.71■■■□□ 2.83
Ccdc60Q8C4J0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Ccdc60Q8C4J0 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Ccdc60Q8C4J0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms