Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Eri3Q8C460 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Eri3Q8C460 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Eri3Q8C460 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
Eri3Q8C460 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
Eri3Q8C460 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Eri3Q8C460 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Eri3Q8C460 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.9■■□□□ 1.58
Eri3Q8C460 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Eri3Q8C460 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Eri3Q8C460 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Eri3Q8C460 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Eri3Q8C460 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.81■■□□□ 1.56
Eri3Q8C460 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Eri3Q8C460 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Eri3Q8C460 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Eri3Q8C460 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Eri3Q8C460 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Eri3Q8C460 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Eri3Q8C460 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Eri3Q8C460 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.73■■□□□ 1.55
Eri3Q8C460 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
Eri3Q8C460 Gm24804-201ENSMUST00000174982 85 ntBASIC24.7■■□□□ 1.54
Eri3Q8C460 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Eri3Q8C460 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Eri3Q8C460 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Eri3Q8C460 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
Eri3Q8C460 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Eri3Q8C460 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Eri3Q8C460 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Eri3Q8C460 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Eri3Q8C460 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.53
Eri3Q8C460 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Eri3Q8C460 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Eri3Q8C460 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.61■■□□□ 1.53
Eri3Q8C460 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Eri3Q8C460 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Eri3Q8C460 Peli2-204ENSMUST00000226513 1320 ntBASIC24.59■■□□□ 1.53
Eri3Q8C460 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Eri3Q8C460 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
Eri3Q8C460 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Eri3Q8C460 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Eri3Q8C460 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.52■■□□□ 1.52
Eri3Q8C460 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Eri3Q8C460 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Eri3Q8C460 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Eri3Q8C460 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Eri3Q8C460 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.49■■□□□ 1.51
Eri3Q8C460 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Eri3Q8C460 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
Eri3Q8C460 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Eri3Q8C460 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Eri3Q8C460 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Eri3Q8C460 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Eri3Q8C460 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.43■■□□□ 1.5
Eri3Q8C460 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Eri3Q8C460 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.41■■□□□ 1.5
Eri3Q8C460 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Eri3Q8C460 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Eri3Q8C460 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Eri3Q8C460 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Eri3Q8C460 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Eri3Q8C460 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Eri3Q8C460 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Eri3Q8C460 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Eri3Q8C460 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Eri3Q8C460 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Eri3Q8C460 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Eri3Q8C460 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Eri3Q8C460 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Eri3Q8C460 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Eri3Q8C460 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Eri3Q8C460 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.32■■□□□ 1.48
Eri3Q8C460 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Eri3Q8C460 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.31■■□□□ 1.48
Eri3Q8C460 Gm16148-201ENSMUST00000119653 893 ntBASIC24.3■■□□□ 1.48
Eri3Q8C460 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Eri3Q8C460 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Eri3Q8C460 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Eri3Q8C460 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Eri3Q8C460 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.25■■□□□ 1.47
Eri3Q8C460 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Eri3Q8C460 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
Eri3Q8C460 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Eri3Q8C460 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Eri3Q8C460 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Eri3Q8C460 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Eri3Q8C460 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Eri3Q8C460 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.23■■□□□ 1.47
Eri3Q8C460 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.22■■□□□ 1.47
Eri3Q8C460 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Eri3Q8C460 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.21■■□□□ 1.47
Eri3Q8C460 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Eri3Q8C460 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
Eri3Q8C460 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Eri3Q8C460 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Eri3Q8C460 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.17■■□□□ 1.46
Eri3Q8C460 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Eri3Q8C460 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Eri3Q8C460 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 9.4 ms