Protein–RNA interactions for Protein: Q8BKD6

Rnf144b, E3 ubiquitin-protein ligase RNF144B, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf144bQ8BKD6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rnf144bQ8BKD6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rnf144bQ8BKD6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Rnf144bQ8BKD6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf144bQ8BKD6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf144bQ8BKD6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC22.25■■□□□ 1.15
Rnf144bQ8BKD6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rnf144bQ8BKD6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rnf144bQ8BKD6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.23■■□□□ 1.15
Rnf144bQ8BKD6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rnf144bQ8BKD6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rnf144bQ8BKD6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rnf144bQ8BKD6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Rnf144bQ8BKD6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC22.2■■□□□ 1.14
Rnf144bQ8BKD6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rnf144bQ8BKD6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rnf144bQ8BKD6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rnf144bQ8BKD6 Gm8109-201ENSMUST00000194076 746 ntBASIC22.17■■□□□ 1.14
Rnf144bQ8BKD6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rnf144bQ8BKD6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rnf144bQ8BKD6 Gm17082-201ENSMUST00000166043 1091 ntBASIC22.16■■□□□ 1.14
Rnf144bQ8BKD6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf144bQ8BKD6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf144bQ8BKD6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf144bQ8BKD6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.12■■□□□ 1.13
Rnf144bQ8BKD6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC22.12■■□□□ 1.13
Rnf144bQ8BKD6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf144bQ8BKD6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC22.11■■□□□ 1.13
Rnf144bQ8BKD6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf144bQ8BKD6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Rnf144bQ8BKD6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf144bQ8BKD6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf144bQ8BKD6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
Rnf144bQ8BKD6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf144bQ8BKD6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Rnf144bQ8BKD6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.05■■□□□ 1.12
Rnf144bQ8BKD6 Gm27322-201ENSMUST00000184007 104 ntBASIC22.04■■□□□ 1.12
Rnf144bQ8BKD6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf144bQ8BKD6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf144bQ8BKD6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22■■□□□ 1.11
Rnf144bQ8BKD6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rnf144bQ8BKD6 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.98■■□□□ 1.11
Rnf144bQ8BKD6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Rnf144bQ8BKD6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Rnf144bQ8BKD6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rnf144bQ8BKD6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rnf144bQ8BKD6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Rnf144bQ8BKD6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Rnf144bQ8BKD6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rnf144bQ8BKD6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf144bQ8BKD6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf144bQ8BKD6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf144bQ8BKD6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf144bQ8BKD6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.94■■□□□ 1.1
Rnf144bQ8BKD6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
Rnf144bQ8BKD6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.92■■□□□ 1.1
Rnf144bQ8BKD6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rnf144bQ8BKD6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.91■■□□□ 1.1
Rnf144bQ8BKD6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rnf144bQ8BKD6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rnf144bQ8BKD6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf144bQ8BKD6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Rnf144bQ8BKD6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf144bQ8BKD6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Rnf144bQ8BKD6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf144bQ8BKD6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf144bQ8BKD6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf144bQ8BKD6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rnf144bQ8BKD6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rnf144bQ8BKD6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rnf144bQ8BKD6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rnf144bQ8BKD6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf144bQ8BKD6 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.81■■□□□ 1.08
Rnf144bQ8BKD6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf144bQ8BKD6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf144bQ8BKD6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf144bQ8BKD6 Zxda-201ENSMUST00000117281 2621 ntBASIC21.74■■□□□ 1.07
Rnf144bQ8BKD6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf144bQ8BKD6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Rnf144bQ8BKD6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Rnf144bQ8BKD6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf144bQ8BKD6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf144bQ8BKD6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf144bQ8BKD6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Rnf144bQ8BKD6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf144bQ8BKD6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf144bQ8BKD6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf144bQ8BKD6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf144bQ8BKD6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf144bQ8BKD6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Rnf144bQ8BKD6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf144bQ8BKD6 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.64■■□□□ 1.05
Rnf144bQ8BKD6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf144bQ8BKD6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf144bQ8BKD6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.63■■□□□ 1.05
Rnf144bQ8BKD6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf144bQ8BKD6 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.62■■□□□ 1.05
Rnf144bQ8BKD6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf144bQ8BKD6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf144bQ8BKD6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms