Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdh20Q8BIZ0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdh20Q8BIZ0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.16■■□□□ 1.62
Pcdh20Q8BIZ0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdh20Q8BIZ0 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.14■■□□□ 1.61
Pcdh20Q8BIZ0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdh20Q8BIZ0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdh20Q8BIZ0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdh20Q8BIZ0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdh20Q8BIZ0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdh20Q8BIZ0 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.09■■□□□ 1.61
Pcdh20Q8BIZ0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdh20Q8BIZ0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Pcdh20Q8BIZ0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Pcdh20Q8BIZ0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.08■■□□□ 1.6
Pcdh20Q8BIZ0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcdh20Q8BIZ0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.06■■□□□ 1.6
Pcdh20Q8BIZ0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdh20Q8BIZ0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdh20Q8BIZ0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdh20Q8BIZ0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdh20Q8BIZ0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.99■■□□□ 1.59
Pcdh20Q8BIZ0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdh20Q8BIZ0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdh20Q8BIZ0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
Pcdh20Q8BIZ0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdh20Q8BIZ0 Gm24804-201ENSMUST00000174982 85 ntBASIC24.95■■□□□ 1.58
Pcdh20Q8BIZ0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdh20Q8BIZ0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdh20Q8BIZ0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.9■■□□□ 1.58
Pcdh20Q8BIZ0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.89■■□□□ 1.58
Pcdh20Q8BIZ0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdh20Q8BIZ0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdh20Q8BIZ0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.87■■□□□ 1.57
Pcdh20Q8BIZ0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdh20Q8BIZ0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.84■■□□□ 1.57
Pcdh20Q8BIZ0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Pcdh20Q8BIZ0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Pcdh20Q8BIZ0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Pcdh20Q8BIZ0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Pcdh20Q8BIZ0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdh20Q8BIZ0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdh20Q8BIZ0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdh20Q8BIZ0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdh20Q8BIZ0 Zxda-201ENSMUST00000117281 2621 ntBASIC24.76■■□□□ 1.55
Pcdh20Q8BIZ0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdh20Q8BIZ0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdh20Q8BIZ0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdh20Q8BIZ0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdh20Q8BIZ0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdh20Q8BIZ0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdh20Q8BIZ0 Mipep-204ENSMUST00000225043 1548 ntBASIC24.73■■□□□ 1.55
Pcdh20Q8BIZ0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdh20Q8BIZ0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdh20Q8BIZ0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdh20Q8BIZ0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
Pcdh20Q8BIZ0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Pcdh20Q8BIZ0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdh20Q8BIZ0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
Pcdh20Q8BIZ0 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.68■■□□□ 1.54
Pcdh20Q8BIZ0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdh20Q8BIZ0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdh20Q8BIZ0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdh20Q8BIZ0 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.65■■□□□ 1.54
Pcdh20Q8BIZ0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Pcdh20Q8BIZ0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdh20Q8BIZ0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdh20Q8BIZ0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdh20Q8BIZ0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdh20Q8BIZ0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdh20Q8BIZ0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdh20Q8BIZ0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdh20Q8BIZ0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.56■■□□□ 1.52
Pcdh20Q8BIZ0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdh20Q8BIZ0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdh20Q8BIZ0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdh20Q8BIZ0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdh20Q8BIZ0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdh20Q8BIZ0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdh20Q8BIZ0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Pcdh20Q8BIZ0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Pcdh20Q8BIZ0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdh20Q8BIZ0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.5■■□□□ 1.51
Pcdh20Q8BIZ0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
Pcdh20Q8BIZ0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Pcdh20Q8BIZ0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdh20Q8BIZ0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdh20Q8BIZ0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Pcdh20Q8BIZ0 Peli2-204ENSMUST00000226513 1320 ntBASIC24.46■■□□□ 1.51
Pcdh20Q8BIZ0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Pcdh20Q8BIZ0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.45■■□□□ 1.5
Pcdh20Q8BIZ0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdh20Q8BIZ0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdh20Q8BIZ0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdh20Q8BIZ0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdh20Q8BIZ0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdh20Q8BIZ0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdh20Q8BIZ0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Pcdh20Q8BIZ0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdh20Q8BIZ0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms