Protein–RNA interactions for Protein: Q8BGR2

Lrrc8d, Volume-regulated anion channel subunit LRRC8D, mousemouse

Predictions only

Length 859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc8dQ8BGR2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Lrrc8dQ8BGR2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.39■■□□□ 1.66
Lrrc8dQ8BGR2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Lrrc8dQ8BGR2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
Lrrc8dQ8BGR2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.35■■□□□ 1.65
Lrrc8dQ8BGR2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Lrrc8dQ8BGR2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.33■■□□□ 1.64
Lrrc8dQ8BGR2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Lrrc8dQ8BGR2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Lrrc8dQ8BGR2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Lrrc8dQ8BGR2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Lrrc8dQ8BGR2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Lrrc8dQ8BGR2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Lrrc8dQ8BGR2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Lrrc8dQ8BGR2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Lrrc8dQ8BGR2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Lrrc8dQ8BGR2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Lrrc8dQ8BGR2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Lrrc8dQ8BGR2 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.22■■□□□ 1.63
Lrrc8dQ8BGR2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Lrrc8dQ8BGR2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Lrrc8dQ8BGR2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Lrrc8dQ8BGR2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Lrrc8dQ8BGR2 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.19■■□□□ 1.62
Lrrc8dQ8BGR2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Lrrc8dQ8BGR2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Lrrc8dQ8BGR2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Lrrc8dQ8BGR2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Lrrc8dQ8BGR2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
Lrrc8dQ8BGR2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.15■■□□□ 1.62
Lrrc8dQ8BGR2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.14■■□□□ 1.62
Lrrc8dQ8BGR2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.14■■□□□ 1.61
Lrrc8dQ8BGR2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Lrrc8dQ8BGR2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Lrrc8dQ8BGR2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Lrrc8dQ8BGR2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Lrrc8dQ8BGR2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Lrrc8dQ8BGR2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Lrrc8dQ8BGR2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Lrrc8dQ8BGR2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Lrrc8dQ8BGR2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Lrrc8dQ8BGR2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Lrrc8dQ8BGR2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Lrrc8dQ8BGR2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Lrrc8dQ8BGR2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Lrrc8dQ8BGR2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Lrrc8dQ8BGR2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Lrrc8dQ8BGR2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Lrrc8dQ8BGR2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Lrrc8dQ8BGR2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25■■□□□ 1.59
Lrrc8dQ8BGR2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
Lrrc8dQ8BGR2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Lrrc8dQ8BGR2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.96■■□□□ 1.59
Lrrc8dQ8BGR2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Lrrc8dQ8BGR2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Lrrc8dQ8BGR2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Lrrc8dQ8BGR2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Lrrc8dQ8BGR2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Lrrc8dQ8BGR2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Lrrc8dQ8BGR2 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.91■■□□□ 1.58
Lrrc8dQ8BGR2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Lrrc8dQ8BGR2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
Lrrc8dQ8BGR2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Lrrc8dQ8BGR2 Zfp131-205ENSMUST00000223812 663 ntBASIC24.85■■□□□ 1.57
Lrrc8dQ8BGR2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Lrrc8dQ8BGR2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Lrrc8dQ8BGR2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Lrrc8dQ8BGR2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Lrrc8dQ8BGR2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
Lrrc8dQ8BGR2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Lrrc8dQ8BGR2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Lrrc8dQ8BGR2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Lrrc8dQ8BGR2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.79■■□□□ 1.56
Lrrc8dQ8BGR2 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.78■■□□□ 1.56
Lrrc8dQ8BGR2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Lrrc8dQ8BGR2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
Lrrc8dQ8BGR2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Lrrc8dQ8BGR2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
Lrrc8dQ8BGR2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Lrrc8dQ8BGR2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.74■■□□□ 1.55
Lrrc8dQ8BGR2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.73■■□□□ 1.55
Lrrc8dQ8BGR2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
Lrrc8dQ8BGR2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Lrrc8dQ8BGR2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
Lrrc8dQ8BGR2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Lrrc8dQ8BGR2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Lrrc8dQ8BGR2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Lrrc8dQ8BGR2 Zxda-201ENSMUST00000117281 2621 ntBASIC24.7■■□□□ 1.55
Lrrc8dQ8BGR2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
Lrrc8dQ8BGR2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Lrrc8dQ8BGR2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Lrrc8dQ8BGR2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Lrrc8dQ8BGR2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.68■■□□□ 1.54
Lrrc8dQ8BGR2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
Lrrc8dQ8BGR2 Mipep-204ENSMUST00000225043 1548 ntBASIC24.67■■□□□ 1.54
Lrrc8dQ8BGR2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Lrrc8dQ8BGR2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Lrrc8dQ8BGR2 Gm16148-201ENSMUST00000119653 893 ntBASIC24.66■■□□□ 1.54
Lrrc8dQ8BGR2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Lrrc8dQ8BGR2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms