Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Ubp1Q811S7 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Ubp1Q811S7 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Ubp1Q811S7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Ubp1Q811S7 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Ubp1Q811S7 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Ubp1Q811S7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
Ubp1Q811S7 Gm24804-201ENSMUST00000174982 85 ntBASIC25.71■■□□□ 1.71
Ubp1Q811S7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Ubp1Q811S7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ubp1Q811S7 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ubp1Q811S7 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Ubp1Q811S7 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ubp1Q811S7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Ubp1Q811S7 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.64■■□□□ 1.7
Ubp1Q811S7 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.62■■□□□ 1.69
Ubp1Q811S7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ubp1Q811S7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
Ubp1Q811S7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ubp1Q811S7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ubp1Q811S7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ubp1Q811S7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ubp1Q811S7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25.54■■□□□ 1.68
Ubp1Q811S7 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ubp1Q811S7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ubp1Q811S7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ubp1Q811S7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ubp1Q811S7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ubp1Q811S7 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Ubp1Q811S7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ubp1Q811S7 Peli2-204ENSMUST00000226513 1320 ntBASIC25.51■■□□□ 1.67
Ubp1Q811S7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Ubp1Q811S7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ubp1Q811S7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ubp1Q811S7 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.47■■□□□ 1.67
Ubp1Q811S7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Ubp1Q811S7 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.46■■□□□ 1.67
Ubp1Q811S7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Ubp1Q811S7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Ubp1Q811S7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.43■■□□□ 1.66
Ubp1Q811S7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ubp1Q811S7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
Ubp1Q811S7 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Ubp1Q811S7 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.42■■□□□ 1.66
Ubp1Q811S7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ubp1Q811S7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.4■■□□□ 1.66
Ubp1Q811S7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ubp1Q811S7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Ubp1Q811S7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ubp1Q811S7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Ubp1Q811S7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ubp1Q811S7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.33■■□□□ 1.64
Ubp1Q811S7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Ubp1Q811S7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
Ubp1Q811S7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ubp1Q811S7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ubp1Q811S7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ubp1Q811S7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.26■■□□□ 1.63
Ubp1Q811S7 Gm16148-201ENSMUST00000119653 893 ntBASIC25.25■■□□□ 1.63
Ubp1Q811S7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
Ubp1Q811S7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ubp1Q811S7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Ubp1Q811S7 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Ubp1Q811S7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Ubp1Q811S7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ubp1Q811S7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Ubp1Q811S7 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ubp1Q811S7 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.14■■□□□ 1.62
Ubp1Q811S7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ubp1Q811S7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ubp1Q811S7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Ubp1Q811S7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
Ubp1Q811S7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.12■■□□□ 1.61
Ubp1Q811S7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Ubp1Q811S7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Ubp1Q811S7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ubp1Q811S7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ubp1Q811S7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Ubp1Q811S7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ubp1Q811S7 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ubp1Q811S7 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ubp1Q811S7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Ubp1Q811S7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ubp1Q811S7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Ubp1Q811S7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ubp1Q811S7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Ubp1Q811S7 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Ubp1Q811S7 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ubp1Q811S7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Ubp1Q811S7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.05■■□□□ 1.6
Ubp1Q811S7 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ubp1Q811S7 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
Ubp1Q811S7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ubp1Q811S7 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Ubp1Q811S7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
Ubp1Q811S7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25■■□□□ 1.59
Ubp1Q811S7 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ubp1Q811S7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Ubp1Q811S7 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.98■■□□□ 1.59
Ubp1Q811S7 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.98■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms