Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Gm2415-204ENSMUST00000190235 2004 ntBASIC28,56■■■□□ 2,16
Sh3d21Q7TSG5 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28,54■■■□□ 2,16
Sh3d21Q7TSG5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28,52■■■□□ 2,16
Sh3d21Q7TSG5 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28,51■■■□□ 2,15
Sh3d21Q7TSG5 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28,47■■■□□ 2,15
Sh3d21Q7TSG5 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28,46■■■□□ 2,15
Sh3d21Q7TSG5 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28,45■■■□□ 2,15
Sh3d21Q7TSG5 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28,45■■■□□ 2,14
Sh3d21Q7TSG5 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC28,44■■■□□ 2,14
Sh3d21Q7TSG5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28,42■■■□□ 2,14
Sh3d21Q7TSG5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28,42■■■□□ 2,14
Sh3d21Q7TSG5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28,42■■■□□ 2,14
Sh3d21Q7TSG5 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28,41■■■□□ 2,14
Sh3d21Q7TSG5 Gm6658-202ENSMUST00000209493 1885 ntBASIC28,39■■■□□ 2,14
Sh3d21Q7TSG5 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28,39■■■□□ 2,13
Sh3d21Q7TSG5 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28,36■■■□□ 2,13
Sh3d21Q7TSG5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28,35■■■□□ 2,13
Sh3d21Q7TSG5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28,34■■■□□ 2,13
Sh3d21Q7TSG5 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28,3■■■□□ 2,12
Sh3d21Q7TSG5 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28,28■■■□□ 2,12
Sh3d21Q7TSG5 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC28,27■■■□□ 2,12
Sh3d21Q7TSG5 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28,27■■■□□ 2,12
Sh3d21Q7TSG5 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28,27■■■□□ 2,12
Sh3d21Q7TSG5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28,26■■■□□ 2,11
Sh3d21Q7TSG5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28,26■■■□□ 2,11
Sh3d21Q7TSG5 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28,25■■■□□ 2,11
Sh3d21Q7TSG5 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28,25■■■□□ 2,11
Sh3d21Q7TSG5 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28,24■■■□□ 2,11
Sh3d21Q7TSG5 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28,22■■■□□ 2,11
Sh3d21Q7TSG5 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28,22■■■□□ 2,11
Sh3d21Q7TSG5 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28,21■■■□□ 2,11
Sh3d21Q7TSG5 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28,2■■■□□ 2,1
Sh3d21Q7TSG5 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28,2■■■□□ 2,1
Sh3d21Q7TSG5 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC28,18■■■□□ 2,1
Sh3d21Q7TSG5 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28,16■■■□□ 2,1
Sh3d21Q7TSG5 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28,16■■■□□ 2,1
Sh3d21Q7TSG5 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28,16■■■□□ 2,1
Sh3d21Q7TSG5 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC28,14■■■□□ 2,1
Sh3d21Q7TSG5 Gm24804-201ENSMUST00000174982 85 ntBASIC28,14■■■□□ 2,1
Sh3d21Q7TSG5 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28,14■■■□□ 2,09
Sh3d21Q7TSG5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28,13■■■□□ 2,09
Sh3d21Q7TSG5 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28,1■■■□□ 2,09
Sh3d21Q7TSG5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28,09■■■□□ 2,09
Sh3d21Q7TSG5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC28,09■■■□□ 2,09
Sh3d21Q7TSG5 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC28,09■■■□□ 2,09
Sh3d21Q7TSG5 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28,08■■■□□ 2,09
Sh3d21Q7TSG5 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC28,08■■■□□ 2,09
Sh3d21Q7TSG5 Peli2-204ENSMUST00000226513 1320 ntBASIC28,07■■■□□ 2,08
Sh3d21Q7TSG5 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28,06■■■□□ 2,08
Sh3d21Q7TSG5 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28,04■■■□□ 2,08
Sh3d21Q7TSG5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28,04■■■□□ 2,08
Sh3d21Q7TSG5 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28,03■■■□□ 2,08
Sh3d21Q7TSG5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28,02■■■□□ 2,08
Sh3d21Q7TSG5 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC28,02■■■□□ 2,08
Sh3d21Q7TSG5 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28,01■■■□□ 2,07
Sh3d21Q7TSG5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2,07
Sh3d21Q7TSG5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27,99■■■□□ 2,07
Sh3d21Q7TSG5 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27,99■■■□□ 2,07
Sh3d21Q7TSG5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27,97■■■□□ 2,07
Sh3d21Q7TSG5 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC27,95■■■□□ 2,07
Sh3d21Q7TSG5 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC27,95■■■□□ 2,07
Sh3d21Q7TSG5 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27,94■■■□□ 2,06
Sh3d21Q7TSG5 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC27,91■■■□□ 2,06
Sh3d21Q7TSG5 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC27,87■■■□□ 2,05
Sh3d21Q7TSG5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC27,87■■■□□ 2,05
Sh3d21Q7TSG5 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC27,87■■■□□ 2,05
Sh3d21Q7TSG5 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27,86■■■□□ 2,05
Sh3d21Q7TSG5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27,84■■■□□ 2,05
Sh3d21Q7TSG5 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC27,84■■■□□ 2,05
Sh3d21Q7TSG5 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC27,84■■■□□ 2,05
Sh3d21Q7TSG5 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC27,83■■■□□ 2,05
Sh3d21Q7TSG5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27,82■■■□□ 2,04
Sh3d21Q7TSG5 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC27,82■■■□□ 2,04
Sh3d21Q7TSG5 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27,82■■■□□ 2,04
Sh3d21Q7TSG5 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC27,81■■■□□ 2,04
Sh3d21Q7TSG5 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC27,81■■■□□ 2,04
Sh3d21Q7TSG5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27,81■■■□□ 2,04
Sh3d21Q7TSG5 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27,8■■■□□ 2,04
Sh3d21Q7TSG5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27,79■■■□□ 2,04
Sh3d21Q7TSG5 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC27,79■■■□□ 2,04
Sh3d21Q7TSG5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27,78■■■□□ 2,04
Sh3d21Q7TSG5 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC27,78■■■□□ 2,04
Sh3d21Q7TSG5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27,78■■■□□ 2,04
Sh3d21Q7TSG5 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC27,77■■■□□ 2,04
Sh3d21Q7TSG5 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27,76■■■□□ 2,04
Sh3d21Q7TSG5 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27,76■■■□□ 2,03
Sh3d21Q7TSG5 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC27,76■■■□□ 2,03
Sh3d21Q7TSG5 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27,75■■■□□ 2,03
Sh3d21Q7TSG5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27,75■■■□□ 2,03
Sh3d21Q7TSG5 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC27,74■■■□□ 2,03
Sh3d21Q7TSG5 Gm16148-201ENSMUST00000119653 893 ntBASIC27,74■■■□□ 2,03
Sh3d21Q7TSG5 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27,74■■■□□ 2,03
Sh3d21Q7TSG5 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC27,73■■■□□ 2,03
Sh3d21Q7TSG5 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27,73■■■□□ 2,03
Sh3d21Q7TSG5 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC27,72■■■□□ 2,03
Sh3d21Q7TSG5 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC27,72■■■□□ 2,03
Sh3d21Q7TSG5 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27,72■■■□□ 2,03
Sh3d21Q7TSG5 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC27,72■■■□□ 2,03
Sh3d21Q7TSG5 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27,71■■■□□ 2,03
Sh3d21Q7TSG5 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27,71■■■□□ 2,03
Retrieved 100 of 76,532 protein–RNA pairs in 36,7 ms