Protein–RNA interactions for Protein: Q7TN37

Trpm4, Transient receptor potential cation channel subfamily M member 4, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm4Q7TN37 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26,58■■□□□ 1,85
Trpm4Q7TN37 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26,58■■□□□ 1,85
Trpm4Q7TN37 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26,55■■□□□ 1,84
Trpm4Q7TN37 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26,54■■□□□ 1,84
Trpm4Q7TN37 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26,53■■□□□ 1,84
Trpm4Q7TN37 Gm6658-202ENSMUST00000209493 1885 ntBASIC26,53■■□□□ 1,84
Trpm4Q7TN37 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26,52■■□□□ 1,84
Trpm4Q7TN37 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26,52■■□□□ 1,84
Trpm4Q7TN37 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26,49■■□□□ 1,83
Trpm4Q7TN37 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26,47■■□□□ 1,83
Trpm4Q7TN37 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26,45■■□□□ 1,82
Trpm4Q7TN37 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26,44■■□□□ 1,82
Trpm4Q7TN37 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26,42■■□□□ 1,82
Trpm4Q7TN37 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26,41■■□□□ 1,82
Trpm4Q7TN37 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26,41■■□□□ 1,82
Trpm4Q7TN37 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26,41■■□□□ 1,82
Trpm4Q7TN37 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26,41■■□□□ 1,82
Trpm4Q7TN37 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26,4■■□□□ 1,82
Trpm4Q7TN37 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26,39■■□□□ 1,82
Trpm4Q7TN37 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26,37■■□□□ 1,81
Trpm4Q7TN37 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26,35■■□□□ 1,81
Trpm4Q7TN37 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26,34■■□□□ 1,81
Trpm4Q7TN37 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26,34■■□□□ 1,81
Trpm4Q7TN37 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26,34■■□□□ 1,81
Trpm4Q7TN37 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26,33■■□□□ 1,81
Trpm4Q7TN37 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26,33■■□□□ 1,81
Trpm4Q7TN37 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26,3■■□□□ 1,8
Trpm4Q7TN37 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26,29■■□□□ 1,8
Trpm4Q7TN37 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26,29■■□□□ 1,8
Trpm4Q7TN37 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26,29■■□□□ 1,8
Trpm4Q7TN37 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26,28■■□□□ 1,8
Trpm4Q7TN37 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26,28■■□□□ 1,8
Trpm4Q7TN37 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26,28■■□□□ 1,8
Trpm4Q7TN37 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26,27■■□□□ 1,8
Trpm4Q7TN37 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26,26■■□□□ 1,79
Trpm4Q7TN37 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26,24■■□□□ 1,79
Trpm4Q7TN37 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26,24■■□□□ 1,79
Trpm4Q7TN37 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26,23■■□□□ 1,79
Trpm4Q7TN37 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26,23■■□□□ 1,79
Trpm4Q7TN37 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26,22■■□□□ 1,79
Trpm4Q7TN37 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26,2■■□□□ 1,78
Trpm4Q7TN37 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26,19■■□□□ 1,78
Trpm4Q7TN37 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26,18■■□□□ 1,78
Trpm4Q7TN37 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26,18■■□□□ 1,78
Trpm4Q7TN37 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26,16■■□□□ 1,78
Trpm4Q7TN37 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26,15■■□□□ 1,78
Trpm4Q7TN37 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26,15■■□□□ 1,78
Trpm4Q7TN37 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26,15■■□□□ 1,78
Trpm4Q7TN37 AC166822.3-201ENSMUST00000227394 661 ntBASIC26,12■■□□□ 1,77
Trpm4Q7TN37 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26,11■■□□□ 1,77
Trpm4Q7TN37 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26,1■■□□□ 1,77
Trpm4Q7TN37 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26,1■■□□□ 1,77
Trpm4Q7TN37 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26,08■■□□□ 1,77
Trpm4Q7TN37 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26,07■■□□□ 1,76
Trpm4Q7TN37 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26,06■■□□□ 1,76
Trpm4Q7TN37 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26,06■■□□□ 1,76
Trpm4Q7TN37 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26,06■■□□□ 1,76
Trpm4Q7TN37 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26,05■■□□□ 1,76
Trpm4Q7TN37 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26,03■■□□□ 1,76
Trpm4Q7TN37 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26,03■■□□□ 1,76
Trpm4Q7TN37 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26,02■■□□□ 1,76
Trpm4Q7TN37 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26,02■■□□□ 1,76
Trpm4Q7TN37 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26,01■■□□□ 1,75
Trpm4Q7TN37 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1,75
Trpm4Q7TN37 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25,97■■□□□ 1,75
Trpm4Q7TN37 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25,97■■□□□ 1,75
Trpm4Q7TN37 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25,96■■□□□ 1,75
Trpm4Q7TN37 Gm6206-201ENSMUST00000133472 2199 ntBASIC25,94■■□□□ 1,74
Trpm4Q7TN37 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25,93■■□□□ 1,74
Trpm4Q7TN37 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25,93■■□□□ 1,74
Trpm4Q7TN37 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25,93■■□□□ 1,74
Trpm4Q7TN37 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25,92■■□□□ 1,74
Trpm4Q7TN37 Mipep-204ENSMUST00000225043 1548 ntBASIC25,92■■□□□ 1,74
Trpm4Q7TN37 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25,91■■□□□ 1,74
Trpm4Q7TN37 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25,91■■□□□ 1,74
Trpm4Q7TN37 Gm16148-201ENSMUST00000119653 893 ntBASIC25,91■■□□□ 1,74
Trpm4Q7TN37 AL845457.1-201ENSMUST00000197244 68 ntBASIC25,91■■□□□ 1,74
Trpm4Q7TN37 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25,9■■□□□ 1,74
Trpm4Q7TN37 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25,9■■□□□ 1,74
Trpm4Q7TN37 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25,9■■□□□ 1,74
Trpm4Q7TN37 Tdp2-203ENSMUST00000223804 1136 ntBASIC25,89■■□□□ 1,74
Trpm4Q7TN37 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25,88■■□□□ 1,73
Trpm4Q7TN37 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25,87■■□□□ 1,73
Trpm4Q7TN37 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25,86■■□□□ 1,73
Trpm4Q7TN37 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25,85■■□□□ 1,73
Trpm4Q7TN37 Gm9905-201ENSMUST00000065740 1845 ntBASIC25,84■■□□□ 1,73
Trpm4Q7TN37 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25,83■■□□□ 1,73
Trpm4Q7TN37 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25,83■■□□□ 1,73
Trpm4Q7TN37 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25,81■■□□□ 1,72
Trpm4Q7TN37 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25,81■■□□□ 1,72
Trpm4Q7TN37 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25,8■■□□□ 1,72
Trpm4Q7TN37 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25,8■■□□□ 1,72
Trpm4Q7TN37 Zxda-201ENSMUST00000117281 2621 ntBASIC25,79■■□□□ 1,72
Trpm4Q7TN37 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25,78■■□□□ 1,72
Trpm4Q7TN37 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25,78■■□□□ 1,72
Trpm4Q7TN37 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25,78■■□□□ 1,72
Trpm4Q7TN37 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25,77■■□□□ 1,72
Trpm4Q7TN37 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25,77■■□□□ 1,72
Trpm4Q7TN37 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25,76■■□□□ 1,71
Trpm4Q7TN37 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25,75■■□□□ 1,71
Retrieved 100 of 76,532 protein–RNA pairs in 51,4 ms