Protein–RNA interactions for Protein: Q7TN37

Trpm4, Transient receptor potential cation channel subfamily M member 4, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm4Q7TN37 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Trpm4Q7TN37 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Trpm4Q7TN37 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Trpm4Q7TN37 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trpm4Q7TN37 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Trpm4Q7TN37 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.53■■□□□ 1.84
Trpm4Q7TN37 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Trpm4Q7TN37 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Trpm4Q7TN37 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Trpm4Q7TN37 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Trpm4Q7TN37 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Trpm4Q7TN37 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Trpm4Q7TN37 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Trpm4Q7TN37 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Trpm4Q7TN37 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.41■■□□□ 1.82
Trpm4Q7TN37 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Trpm4Q7TN37 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Trpm4Q7TN37 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Trpm4Q7TN37 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Trpm4Q7TN37 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.37■■□□□ 1.81
Trpm4Q7TN37 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Trpm4Q7TN37 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.34■■□□□ 1.81
Trpm4Q7TN37 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trpm4Q7TN37 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trpm4Q7TN37 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Trpm4Q7TN37 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Trpm4Q7TN37 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Trpm4Q7TN37 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Trpm4Q7TN37 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.29■■□□□ 1.8
Trpm4Q7TN37 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.29■■□□□ 1.8
Trpm4Q7TN37 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.28■■□□□ 1.8
Trpm4Q7TN37 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Trpm4Q7TN37 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Trpm4Q7TN37 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Trpm4Q7TN37 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Trpm4Q7TN37 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Trpm4Q7TN37 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
Trpm4Q7TN37 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.23■■□□□ 1.79
Trpm4Q7TN37 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Trpm4Q7TN37 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.22■■□□□ 1.79
Trpm4Q7TN37 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Trpm4Q7TN37 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Trpm4Q7TN37 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Trpm4Q7TN37 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trpm4Q7TN37 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trpm4Q7TN37 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Trpm4Q7TN37 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Trpm4Q7TN37 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
Trpm4Q7TN37 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.12■■□□□ 1.77
Trpm4Q7TN37 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Trpm4Q7TN37 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
Trpm4Q7TN37 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
Trpm4Q7TN37 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.08■■□□□ 1.77
Trpm4Q7TN37 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Trpm4Q7TN37 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Trpm4Q7TN37 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
Trpm4Q7TN37 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Trpm4Q7TN37 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Trpm4Q7TN37 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
Trpm4Q7TN37 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Trpm4Q7TN37 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
Trpm4Q7TN37 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Trpm4Q7TN37 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Trpm4Q7TN37 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Trpm4Q7TN37 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
Trpm4Q7TN37 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
Trpm4Q7TN37 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Trpm4Q7TN37 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.94■■□□□ 1.74
Trpm4Q7TN37 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Trpm4Q7TN37 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.93■■□□□ 1.74
Trpm4Q7TN37 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Trpm4Q7TN37 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Trpm4Q7TN37 Mipep-204ENSMUST00000225043 1548 ntBASIC25.92■■□□□ 1.74
Trpm4Q7TN37 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Trpm4Q7TN37 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Trpm4Q7TN37 Gm16148-201ENSMUST00000119653 893 ntBASIC25.91■■□□□ 1.74
Trpm4Q7TN37 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.91■■□□□ 1.74
Trpm4Q7TN37 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Trpm4Q7TN37 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Trpm4Q7TN37 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Trpm4Q7TN37 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.89■■□□□ 1.74
Trpm4Q7TN37 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Trpm4Q7TN37 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Trpm4Q7TN37 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.86■■□□□ 1.73
Trpm4Q7TN37 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Trpm4Q7TN37 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.84■■□□□ 1.73
Trpm4Q7TN37 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Trpm4Q7TN37 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Trpm4Q7TN37 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Trpm4Q7TN37 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25.81■■□□□ 1.72
Trpm4Q7TN37 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Trpm4Q7TN37 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
Trpm4Q7TN37 Zxda-201ENSMUST00000117281 2621 ntBASIC25.79■■□□□ 1.72
Trpm4Q7TN37 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
Trpm4Q7TN37 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Trpm4Q7TN37 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Trpm4Q7TN37 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
Trpm4Q7TN37 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Trpm4Q7TN37 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Trpm4Q7TN37 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms