Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
R3hdm4Q4VBF2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
R3hdm4Q4VBF2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.6■■■□□ 2.17
R3hdm4Q4VBF2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
R3hdm4Q4VBF2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
R3hdm4Q4VBF2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
R3hdm4Q4VBF2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.59■■■□□ 2.17
R3hdm4Q4VBF2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
R3hdm4Q4VBF2 Gm24804-201ENSMUST00000174982 85 ntBASIC28.56■■■□□ 2.16
R3hdm4Q4VBF2 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.53■■■□□ 2.16
R3hdm4Q4VBF2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
R3hdm4Q4VBF2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.53■■■□□ 2.16
R3hdm4Q4VBF2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
R3hdm4Q4VBF2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
R3hdm4Q4VBF2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
R3hdm4Q4VBF2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
R3hdm4Q4VBF2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28.42■■■□□ 2.14
R3hdm4Q4VBF2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
R3hdm4Q4VBF2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
R3hdm4Q4VBF2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
R3hdm4Q4VBF2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
R3hdm4Q4VBF2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
R3hdm4Q4VBF2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28.37■■■□□ 2.13
R3hdm4Q4VBF2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
R3hdm4Q4VBF2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
R3hdm4Q4VBF2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
R3hdm4Q4VBF2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
R3hdm4Q4VBF2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
R3hdm4Q4VBF2 Peli2-204ENSMUST00000226513 1320 ntBASIC28.34■■■□□ 2.13
R3hdm4Q4VBF2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC28.33■■■□□ 2.13
R3hdm4Q4VBF2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
R3hdm4Q4VBF2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
R3hdm4Q4VBF2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
R3hdm4Q4VBF2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
R3hdm4Q4VBF2 Gm6658-202ENSMUST00000209493 1885 ntBASIC28.29■■■□□ 2.12
R3hdm4Q4VBF2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.28■■■□□ 2.12
R3hdm4Q4VBF2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28.27■■■□□ 2.12
R3hdm4Q4VBF2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
R3hdm4Q4VBF2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
R3hdm4Q4VBF2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.12
R3hdm4Q4VBF2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC28.24■■■□□ 2.11
R3hdm4Q4VBF2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
R3hdm4Q4VBF2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
R3hdm4Q4VBF2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
R3hdm4Q4VBF2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
R3hdm4Q4VBF2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
R3hdm4Q4VBF2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
R3hdm4Q4VBF2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
R3hdm4Q4VBF2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
R3hdm4Q4VBF2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
R3hdm4Q4VBF2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
R3hdm4Q4VBF2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC28.09■■■□□ 2.09
R3hdm4Q4VBF2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
R3hdm4Q4VBF2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC28.08■■■□□ 2.09
R3hdm4Q4VBF2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
R3hdm4Q4VBF2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
R3hdm4Q4VBF2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
R3hdm4Q4VBF2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
R3hdm4Q4VBF2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
R3hdm4Q4VBF2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28.04■■■□□ 2.08
R3hdm4Q4VBF2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
R3hdm4Q4VBF2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
R3hdm4Q4VBF2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
R3hdm4Q4VBF2 Gm16148-201ENSMUST00000119653 893 ntBASIC27.96■■■□□ 2.07
R3hdm4Q4VBF2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC27.95■■■□□ 2.07
R3hdm4Q4VBF2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
R3hdm4Q4VBF2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
R3hdm4Q4VBF2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
R3hdm4Q4VBF2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.92■■■□□ 2.06
R3hdm4Q4VBF2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
R3hdm4Q4VBF2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC27.91■■■□□ 2.06
R3hdm4Q4VBF2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
R3hdm4Q4VBF2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
R3hdm4Q4VBF2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
R3hdm4Q4VBF2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC27.91■■■□□ 2.06
R3hdm4Q4VBF2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC27.9■■■□□ 2.06
R3hdm4Q4VBF2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
R3hdm4Q4VBF2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
R3hdm4Q4VBF2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
R3hdm4Q4VBF2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
R3hdm4Q4VBF2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
R3hdm4Q4VBF2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
R3hdm4Q4VBF2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
R3hdm4Q4VBF2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
R3hdm4Q4VBF2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
R3hdm4Q4VBF2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC27.85■■■□□ 2.05
R3hdm4Q4VBF2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27.84■■■□□ 2.05
R3hdm4Q4VBF2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
R3hdm4Q4VBF2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
R3hdm4Q4VBF2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
R3hdm4Q4VBF2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
R3hdm4Q4VBF2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
R3hdm4Q4VBF2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
R3hdm4Q4VBF2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC27.77■■■□□ 2.04
R3hdm4Q4VBF2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27.76■■■□□ 2.03
R3hdm4Q4VBF2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
R3hdm4Q4VBF2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
R3hdm4Q4VBF2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
R3hdm4Q4VBF2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
R3hdm4Q4VBF2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms