Protein–RNA interactions for Protein: Q07988

YLR040C, Cell wall protein YLR040C, yeastyeast

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YLR040CQ07988 HSP60YLR259C 1719 nt9.97□□□□□ -0.81
YLR040CQ07988 YDL086C-AYDL086C-A 435 nt9.94□□□□□ -0.82
YLR040CQ07988 CCA1YER168C 1641 nt9.93□□□□□ -0.82
YLR040CQ07988 YEL076C-AYEL076C-A 651 nt9.92□□□□□ -0.82
YLR040CQ07988 YEL076CYEL076C 651 nt9.92□□□□□ -0.82
YLR040CQ07988 YLR464WYLR464W 651 nt9.92□□□□□ -0.82
YLR040CQ07988 AQY1YPR192W 918 nt9.92□□□□□ -0.82
YLR040CQ07988 GLK1YCL040W 1503 nt9.92□□□□□ -0.82
YLR040CQ07988 PTH1YHR189W 573 nt9.91□□□□□ -0.82
YLR040CQ07988 YLR235CYLR235C 399 nt9.9□□□□□ -0.82
YLR040CQ07988 FUR4YBR021W 1902 nt9.9□□□□□ -0.83
YLR040CQ07988 ANP1YEL036C 1503 nt9.89□□□□□ -0.83
YLR040CQ07988 BNA2YJR078W 1362 nt9.88□□□□□ -0.83
YLR040CQ07988 TIM23YNR017W 669 nt9.87□□□□□ -0.83
YLR040CQ07988 STB1YNL309W 1263 nt9.86□□□□□ -0.83
YLR040CQ07988 SPP1YPL138C 1062 nt9.86□□□□□ -0.83
YLR040CQ07988 YDR524C-BYDR524C-B 201 nt9.85□□□□□ -0.83
YLR040CQ07988 YLR179CYLR179C 606 nt9.85□□□□□ -0.83
YLR040CQ07988 SPC25YER018C 666 nt9.83□□□□□ -0.84
YLR040CQ07988 FEN2YCR028C 1539 nt9.82□□□□□ -0.84
YLR040CQ07988 RTG1YOL067C 534 nt9.81□□□□□ -0.84
YLR040CQ07988 GPI16YHR188C 1833 nt9.81□□□□□ -0.84
YLR040CQ07988 RPM1RPM1 483 nt9.8□□□□□ -0.84
YLR040CQ07988 MIC12YBR262C 321 nt9.8□□□□□ -0.84
YLR040CQ07988 HUA1YGR268C 597 nt9.79□□□□□ -0.84
YLR040CQ07988 PRP4YPR178W 1398 nt9.76□□□□□ -0.85
YLR040CQ07988 YKL030WYKL030W 606 nt9.75□□□□□ -0.85
YLR040CQ07988 VPS60YDR486C 690 nt9.74□□□□□ -0.85
YLR040CQ07988 YGR139WYGR139W 339 nt9.74□□□□□ -0.85
YLR040CQ07988 AHT1YHR093W 549 nt9.74□□□□□ -0.85
YLR040CQ07988 YIR016WYIR016W 798 nt9.74□□□□□ -0.85
YLR040CQ07988 HHO1YPL127C 777 nt9.74□□□□□ -0.85
YLR040CQ07988 CCT4YDL143W 1587 nt9.74□□□□□ -0.85
YLR040CQ07988 WSC2YNL283C 1512 nt9.73□□□□□ -0.85
YLR040CQ07988 ALG12YNR030W 1656 nt9.73□□□□□ -0.85
YLR040CQ07988 DUS1YML080W 1272 nt9.72□□□□□ -0.85
YLR040CQ07988 AGP1YCL025C 1902 nt9.72□□□□□ -0.85
YLR040CQ07988 UBX6YJL048C 1191 nt9.7□□□□□ -0.86
YLR040CQ07988 YPR064WYPR064W 420 nt9.7□□□□□ -0.86
YLR040CQ07988 NME1NME1 340 nt9.7□□□□□ -0.86
YLR040CQ07988 SWC5YBR231C 912 nt9.7□□□□□ -0.86
YLR040CQ07988 DPS1YLL018C 1674 nt9.69□□□□□ -0.86
YLR040CQ07988 YCL074WYCL074W 927 nt9.68□□□□□ -0.86
YLR040CQ07988 AAC1YMR056C 930 nt9.68□□□□□ -0.86
YLR040CQ07988 ALG3YBL082C 1377 nt9.67□□□□□ -0.86
YLR040CQ07988 BMT6YLR063W 1098 nt9.67□□□□□ -0.86
YLR040CQ07988 YGR201CYGR201C 678 nt9.66□□□□□ -0.86
YLR040CQ07988 YKR005CYKR005C 1578 nt9.66□□□□□ -0.86
YLR040CQ07988 UME6YDR207C 2511 nt9.64□□□□□ -0.87
YLR040CQ07988 TAD3YLR316C 969 nt9.62□□□□□ -0.87
YLR040CQ07988 YDR094WYDR094W 336 nt9.61□□□□□ -0.87
YLR040CQ07988 XDJ1YLR090W 1380 nt9.59□□□□□ -0.87
YLR040CQ07988 YGR259CYGR259C 441 nt9.58□□□□□ -0.88
YLR040CQ07988 MCH5YOR306C 1566 nt9.55□□□□□ -0.88
YLR040CQ07988 GOR1YNL274C 1053 nt9.53□□□□□ -0.88
YLR040CQ07988 AVT6YER119C 1347 nt9.53□□□□□ -0.88
YLR040CQ07988 STR3YGL184C 1398 nt9.52□□□□□ -0.88
YLR040CQ07988 GDH3YAL062W 1374 nt9.52□□□□□ -0.88
YLR040CQ07988 RDN18-1RDN18-1 1800 nt9.52□□□□□ -0.89
YLR040CQ07988 RDN18-2RDN18-2 1800 nt9.52□□□□□ -0.89
YLR040CQ07988 DUT1YBR252W 444 nt9.52□□□□□ -0.89
YLR040CQ07988 SNF1YDR477W 1902 nt9.52□□□□□ -0.89
YLR040CQ07988 IRC24YIR036C 792 nt9.51□□□□□ -0.89
YLR040CQ07988 BDH1YAL060W 1149 nt9.5□□□□□ -0.89
YLR040CQ07988 YLR415CYLR415C 339 nt9.5□□□□□ -0.89
YLR040CQ07988 BIO5YNR056C 1686 nt9.48□□□□□ -0.89
YLR040CQ07988 tL(GAG)GtL(GAG)G 82 nt9.47□□□□□ -0.89
YLR040CQ07988 AQY2YLL052C 450 nt9.47□□□□□ -0.89
YLR040CQ07988 NAR1YNL240C 1476 nt9.47□□□□□ -0.89
YLR040CQ07988 SHM2YLR058C 1410 nt9.43□□□□□ -0.9
YLR040CQ07988 TIM17YJL143W 477 nt9.42□□□□□ -0.9
YLR040CQ07988 RTN2YDL204W 1182 nt9.4□□□□□ -0.9
YLR040CQ07988 YSP3YOR003W 1437 nt9.39□□□□□ -0.91
YLR040CQ07988 YFL015W-AYFL015W-A 318 nt9.37□□□□□ -0.91
YLR040CQ07988 PBP1YGR178C 2169 nt9.37□□□□□ -0.91
YLR040CQ07988 RRT5YFR032C 870 nt9.35□□□□□ -0.91
YLR040CQ07988 CYT2YKL087C 675 nt9.35□□□□□ -0.91
YLR040CQ07988 DAT1YML113W 747 nt9.34□□□□□ -0.91
YLR040CQ07988 NIT1YIL164C 600 nt9.32□□□□□ -0.92
YLR040CQ07988 FRE6YLL051C 2139 nt9.31□□□□□ -0.92
YLR040CQ07988 YCR102CYCR102C 1107 nt9.3□□□□□ -0.92
YLR040CQ07988 YFR018CYFR018C 1092 nt9.3□□□□□ -0.92
YLR040CQ07988 YNL115CYNL115C 1935 nt9.29□□□□□ -0.92
YLR040CQ07988 SGT2YOR007C 1041 nt9.28□□□□□ -0.92
YLR040CQ07988 NBP35YGL091C 987 nt9.27□□□□□ -0.93
YLR040CQ07988 PEX25YPL112C 1185 nt9.25□□□□□ -0.93
YLR040CQ07988 PAU16YKL224C 372 nt9.24□□□□□ -0.93
YLR040CQ07988 PLB1YMR008C 1995 nt9.24□□□□□ -0.93
YLR040CQ07988 ARP6YLR085C 1317 nt9.23□□□□□ -0.93
YLR040CQ07988 VPS75YNL246W 795 nt9.2□□□□□ -0.94
YLR040CQ07988 YFL066CYFL066C 1179 nt9.17□□□□□ -0.94
YLR040CQ07988 PRM5YIL117C 957 nt9.13□□□□□ -0.95
YLR040CQ07988 ALD4YOR374W 1560 nt9.12□□□□□ -0.95
YLR040CQ07988 TIR3YIL011W 810 nt9.12□□□□□ -0.95
YLR040CQ07988 HIF1YLL022C 1158 nt9.12□□□□□ -0.95
YLR040CQ07988 LSC2YGR244C 1284 nt9.11□□□□□ -0.95
YLR040CQ07988 CMP2YML057W 1815 nt9.1□□□□□ -0.95
YLR040CQ07988 YAT1YAR035W 2064 nt9.1□□□□□ -0.95
YLR040CQ07988 PRE6YOL038W 765 nt9.1□□□□□ -0.95
YLR040CQ07988 PAU7YAR020C 168 nt9.09□□□□□ -0.95
Retrieved 100 of 7,029 protein–RNA pairs in 22.3 ms