Protein–RNA interactions for Protein: Q01939

RPT6, 26S proteasome regulatory subunit 8 homolog, yeastyeast

Known RBP Predictions only

Length 405 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT6Q01939 STB1YNL309W 1263 nt12.49□□□□□ -0.41
RPT6Q01939 YFL067WYFL067W 528 nt12.48□□□□□ -0.41
RPT6Q01939 BOP3YNL042W 1191 nt12.48□□□□□ -0.41
RPT6Q01939 RTF1YGL244W 1677 nt12.48□□□□□ -0.41
RPT6Q01939 SPC25YER018C 666 nt12.46□□□□□ -0.41
RPT6Q01939 YFL015W-AYFL015W-A 318 nt12.46□□□□□ -0.41
RPT6Q01939 CRR1YLR213C 1269 nt12.46□□□□□ -0.41
RPT6Q01939 YDR524C-BYDR524C-B 201 nt12.45□□□□□ -0.42
RPT6Q01939 PRE6YOL038W 765 nt12.45□□□□□ -0.42
RPT6Q01939 CCT4YDL143W 1587 nt12.43□□□□□ -0.42
RPT6Q01939 LYS4YDR234W 2082 nt12.43□□□□□ -0.42
RPT6Q01939 PAU16YKL224C 372 nt12.43□□□□□ -0.42
RPT6Q01939 BDH1YAL060W 1149 nt12.42□□□□□ -0.42
RPT6Q01939 YDL086C-AYDL086C-A 435 nt12.41□□□□□ -0.42
RPT6Q01939 GPI16YHR188C 1833 nt12.41□□□□□ -0.42
RPT6Q01939 RRT5YFR032C 870 nt12.4□□□□□ -0.42
RPT6Q01939 YFL066CYFL066C 1179 nt12.39□□□□□ -0.43
RPT6Q01939 VPS60YDR486C 690 nt12.38□□□□□ -0.43
RPT6Q01939 PAC11YDR488C 1602 nt12.37□□□□□ -0.43
RPT6Q01939 HEM12YDR047W 1089 nt12.37□□□□□ -0.43
RPT6Q01939 YLR415CYLR415C 339 nt12.37□□□□□ -0.43
RPT6Q01939 SNG1YGR197C 1644 nt12.37□□□□□ -0.43
RPT6Q01939 YSP3YOR003W 1437 nt12.37□□□□□ -0.43
RPT6Q01939 SWC5YBR231C 912 nt12.36□□□□□ -0.43
RPT6Q01939 MIC10YCL057C-A 294 nt12.36□□□□□ -0.43
RPT6Q01939 ANP1YEL036C 1503 nt12.36□□□□□ -0.43
RPT6Q01939 PEX25YPL112C 1185 nt12.35□□□□□ -0.43
RPT6Q01939 FEN2YCR028C 1539 nt12.35□□□□□ -0.43
RPT6Q01939 ALG3YBL082C 1377 nt12.32□□□□□ -0.44
RPT6Q01939 YNL115CYNL115C 1935 nt12.32□□□□□ -0.44
RPT6Q01939 PTK1YKL198C 1989 nt12.29□□□□□ -0.44
RPT6Q01939 YIR016WYIR016W 798 nt12.24□□□□□ -0.45
RPT6Q01939 SPT8YLR055C 1809 nt12.18□□□□□ -0.46
RPT6Q01939 YHR056W-AYHR056W-A 435 nt12.16□□□□□ -0.46
RPT6Q01939 VPS75YNL246W 795 nt12.13□□□□□ -0.47
RPT6Q01939 BNA2YJR078W 1362 nt12.12□□□□□ -0.47
RPT6Q01939 YFL054CYFL054C 1941 nt12.11□□□□□ -0.47
RPT6Q01939 NAT4YMR069W 858 nt12.11□□□□□ -0.47
RPT6Q01939 GLK1YCL040W 1503 nt12.09□□□□□ -0.47
RPT6Q01939 RAX1YOR301W 1308 nt12.09□□□□□ -0.47
RPT6Q01939 TIM17YJL143W 477 nt12.07□□□□□ -0.48
RPT6Q01939 MIR1YJR077C 936 nt12.06□□□□□ -0.48
RPT6Q01939 MIC12YBR262C 321 nt12.06□□□□□ -0.48
RPT6Q01939 SBA1YKL117W 651 nt12.05□□□□□ -0.48
RPT6Q01939 XDJ1YLR090W 1380 nt12.05□□□□□ -0.48
RPT6Q01939 SHM2YLR058C 1410 nt12.03□□□□□ -0.48
RPT6Q01939 THI74YDR438W 1113 nt12.02□□□□□ -0.49
RPT6Q01939 MSF1YPR047W 1410 nt12□□□□□ -0.49
RPT6Q01939 PAU7YAR020C 168 nt11.99□□□□□ -0.49
RPT6Q01939 HHO1YPL127C 777 nt11.98□□□□□ -0.49
RPT6Q01939 GDH3YAL062W 1374 nt11.97□□□□□ -0.49
RPT6Q01939 YGR201CYGR201C 678 nt11.92□□□□□ -0.5
RPT6Q01939 NIT1YIL164C 600 nt11.92□□□□□ -0.5
RPT6Q01939 DAT1YML113W 747 nt11.91□□□□□ -0.5
RPT6Q01939 SGT2YOR007C 1041 nt11.91□□□□□ -0.5
RPT6Q01939 SHB17YKR043C 816 nt11.88□□□□□ -0.51
RPT6Q01939 AVT6YER119C 1347 nt11.86□□□□□ -0.51
RPT6Q01939 UBA4YHR111W 1323 nt11.86□□□□□ -0.51
RPT6Q01939 CCA1YER168C 1641 nt11.86□□□□□ -0.51
RPT6Q01939 SWE1YJL187C 2460 nt11.84□□□□□ -0.51
RPT6Q01939 AGP1YCL025C 1902 nt11.82□□□□□ -0.52
RPT6Q01939 YDR010CYDR010C 333 nt11.81□□□□□ -0.52
RPT6Q01939 YGL034CYGL034C 366 nt11.8□□□□□ -0.52
RPT6Q01939 YSR3YKR053C 1215 nt11.8□□□□□ -0.52
RPT6Q01939 GOR1YNL274C 1053 nt11.8□□□□□ -0.52
RPT6Q01939 NVJ2YPR091C 2313 nt11.8□□□□□ -0.52
RPT6Q01939 DUT1YBR252W 444 nt11.79□□□□□ -0.52
RPT6Q01939 XYL2YLR070C 1071 nt11.74□□□□□ -0.53
RPT6Q01939 PHO89YBR296C 1725 nt11.72□□□□□ -0.53
RPT6Q01939 RET2YFR051C 1641 nt11.71□□□□□ -0.53
RPT6Q01939 YCR102CYCR102C 1107 nt11.68□□□□□ -0.54
RPT6Q01939 RBG1YAL036C 1110 nt11.66□□□□□ -0.54
RPT6Q01939 DUS1YML080W 1272 nt11.65□□□□□ -0.54
RPT6Q01939 YCR087WYCR087W 516 nt11.64□□□□□ -0.55
RPT6Q01939 YMR244WYMR244W 1068 nt11.64□□□□□ -0.55
RPT6Q01939 NDI1YML120C 1542 nt11.64□□□□□ -0.55
RPT6Q01939 GLR1YPL091W 1452 nt11.62□□□□□ -0.55
RPT6Q01939 SFA1YDL168W 1161 nt11.59□□□□□ -0.55
RPT6Q01939 AIM45YPR004C 1035 nt11.59□□□□□ -0.55
RPT6Q01939 MRP20YDR405W 792 nt11.57□□□□□ -0.56
RPT6Q01939 COQ2YNR041C 1119 nt11.57□□□□□ -0.56
RPT6Q01939 STR3YGL184C 1398 nt11.56□□□□□ -0.56
RPT6Q01939 NBP35YGL091C 987 nt11.56□□□□□ -0.56
RPT6Q01939 YHL019W-AYHL019W-A 594 nt11.55□□□□□ -0.56
RPT6Q01939 AQY2YLL052C 450 nt11.54□□□□□ -0.56
RPT6Q01939 BOR1YNL275W 1731 nt11.54□□□□□ -0.56
RPT6Q01939 RDN18-1RDN18-1 1800 nt11.53□□□□□ -0.56
RPT6Q01939 RDN18-2RDN18-2 1800 nt11.53□□□□□ -0.56
RPT6Q01939 YCL074WYCL074W 927 nt11.52□□□□□ -0.57
RPT6Q01939 SHH4YLR164W 507 nt11.52□□□□□ -0.57
RPT6Q01939 TIR3YIL011W 810 nt11.49□□□□□ -0.57
RPT6Q01939 HSP60YLR259C 1719 nt11.47□□□□□ -0.57
RPT6Q01939 FUR4YBR021W 1902 nt11.45□□□□□ -0.58
RPT6Q01939 TOM6YOR045W 186 nt11.43□□□□□ -0.58
RPT6Q01939 YJL225CYJL225C 5277 nt11.43□□□□□ -0.58
RPT6Q01939 RBG2YGR173W 1107 nt11.42□□□□□ -0.58
RPT6Q01939 RPL4BYDR012W 1089 nt11.41□□□□□ -0.58
RPT6Q01939 RPL4AYBR031W 1089 nt11.41□□□□□ -0.58
RPT6Q01939 POM34YLR018C 900 nt11.4□□□□□ -0.58
RPT6Q01939 PRO1YDR300C 1287 nt11.38□□□□□ -0.59
Retrieved 100 of 7,029 protein–RNA pairs in 6.4 ms