Protein–RNA interactions for Protein: P56475

Gabrr1, Gamma-aminobutyric acid receptor subunit rho-1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabrr1P56475 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Gabrr1P56475 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Gabrr1P56475 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.91■■□□□ 1.1
Gabrr1P56475 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Gabrr1P56475 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Gabrr1P56475 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Gabrr1P56475 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.87■■□□□ 1.09
Gabrr1P56475 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Gabrr1P56475 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.87■■□□□ 1.09
Gabrr1P56475 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Gabrr1P56475 Zxda-201ENSMUST00000117281 2621 ntBASIC21.85■■□□□ 1.09
Gabrr1P56475 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gabrr1P56475 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Gabrr1P56475 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gabrr1P56475 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gabrr1P56475 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gabrr1P56475 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Gabrr1P56475 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.78■■□□□ 1.08
Gabrr1P56475 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gabrr1P56475 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gabrr1P56475 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.76■■□□□ 1.07
Gabrr1P56475 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gabrr1P56475 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Gabrr1P56475 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gabrr1P56475 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Gabrr1P56475 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gabrr1P56475 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gabrr1P56475 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gabrr1P56475 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.71■■□□□ 1.07
Gabrr1P56475 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.69■■□□□ 1.06
Gabrr1P56475 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gabrr1P56475 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Gabrr1P56475 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gabrr1P56475 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Gabrr1P56475 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gabrr1P56475 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gabrr1P56475 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.65■■□□□ 1.06
Gabrr1P56475 Mipep-204ENSMUST00000225043 1548 ntBASIC21.63■■□□□ 1.05
Gabrr1P56475 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gabrr1P56475 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gabrr1P56475 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Gabrr1P56475 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Gabrr1P56475 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Gabrr1P56475 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Gabrr1P56475 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Gabrr1P56475 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Gabrr1P56475 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Gabrr1P56475 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Gabrr1P56475 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Gabrr1P56475 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.56■■□□□ 1.04
Gabrr1P56475 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Gabrr1P56475 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Gabrr1P56475 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Gabrr1P56475 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.54■■□□□ 1.04
Gabrr1P56475 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Gabrr1P56475 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Gabrr1P56475 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Gabrr1P56475 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Gabrr1P56475 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Gabrr1P56475 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.51■■□□□ 1.03
Gabrr1P56475 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gabrr1P56475 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gabrr1P56475 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Gabrr1P56475 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Gabrr1P56475 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Gabrr1P56475 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Gabrr1P56475 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gabrr1P56475 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gabrr1P56475 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Gabrr1P56475 Gm27322-201ENSMUST00000184007 104 ntBASIC21.47■■□□□ 1.03
Gabrr1P56475 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Gabrr1P56475 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Gabrr1P56475 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Gabrr1P56475 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.46■■□□□ 1.03
Gabrr1P56475 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.46■■□□□ 1.03
Gabrr1P56475 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Gabrr1P56475 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Gabrr1P56475 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gabrr1P56475 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gabrr1P56475 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Gabrr1P56475 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Gabrr1P56475 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.42■■□□□ 1.02
Gabrr1P56475 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Gabrr1P56475 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.41■■□□□ 1.02
Gabrr1P56475 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gabrr1P56475 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gabrr1P56475 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Gabrr1P56475 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gabrr1P56475 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gabrr1P56475 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Gabrr1P56475 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gabrr1P56475 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.37■■□□□ 1.01
Gabrr1P56475 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gabrr1P56475 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gabrr1P56475 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.36■■□□□ 1.01
Gabrr1P56475 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.36■■□□□ 1.01
Gabrr1P56475 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.36■■□□□ 1.01
Gabrr1P56475 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gabrr1P56475 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gabrr1P56475 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms