Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Cd27P41272 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cd27P41272 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cd27P41272 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Cd27P41272 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cd27P41272 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cd27P41272 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cd27P41272 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cd27P41272 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.18■□□□□ 0.98
Cd27P41272 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cd27P41272 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cd27P41272 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cd27P41272 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cd27P41272 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cd27P41272 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cd27P41272 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cd27P41272 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cd27P41272 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cd27P41272 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cd27P41272 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cd27P41272 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cd27P41272 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cd27P41272 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cd27P41272 Gm24804-201ENSMUST00000174982 85 ntBASIC21.06■□□□□ 0.96
Cd27P41272 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.06■□□□□ 0.96
Cd27P41272 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cd27P41272 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd27P41272 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cd27P41272 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.98■□□□□ 0.95
Cd27P41272 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
Cd27P41272 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cd27P41272 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cd27P41272 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Cd27P41272 Peli2-204ENSMUST00000226513 1320 ntBASIC20.97■□□□□ 0.95
Cd27P41272 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cd27P41272 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cd27P41272 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cd27P41272 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cd27P41272 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cd27P41272 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cd27P41272 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cd27P41272 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.9■□□□□ 0.94
Cd27P41272 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.9■□□□□ 0.94
Cd27P41272 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd27P41272 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd27P41272 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cd27P41272 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cd27P41272 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Cd27P41272 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.88■□□□□ 0.93
Cd27P41272 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Cd27P41272 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cd27P41272 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cd27P41272 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cd27P41272 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cd27P41272 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cd27P41272 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.81■□□□□ 0.92
Cd27P41272 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cd27P41272 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd27P41272 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cd27P41272 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cd27P41272 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cd27P41272 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Cd27P41272 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Cd27P41272 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Cd27P41272 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cd27P41272 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cd27P41272 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Cd27P41272 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cd27P41272 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cd27P41272 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.74■□□□□ 0.91
Cd27P41272 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cd27P41272 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cd27P41272 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Cd27P41272 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cd27P41272 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Cd27P41272 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cd27P41272 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cd27P41272 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cd27P41272 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cd27P41272 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cd27P41272 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cd27P41272 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
Cd27P41272 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Cd27P41272 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.66■□□□□ 0.9
Cd27P41272 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cd27P41272 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Cd27P41272 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cd27P41272 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Cd27P41272 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cd27P41272 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.63■□□□□ 0.89
Cd27P41272 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cd27P41272 Gm16148-201ENSMUST00000119653 893 ntBASIC20.62■□□□□ 0.89
Cd27P41272 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.62■□□□□ 0.89
Cd27P41272 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cd27P41272 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Cd27P41272 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cd27P41272 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cd27P41272 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cd27P41272 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd27P41272 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms