Protein–RNA interactions for Protein: P40561

SGN1, RNA-binding protein SGN1, yeastyeast

Known RBP RIP-Chip data

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SGN1P40561 GAL1YBR020W 1587 nt9.19□□□□□ -0.94
SGN1P40561 RTF1YGL244W 1677 nt9.17□□□□□ -0.94
SGN1P40561 YFL067WYFL067W 528 nt9.17□□□□□ -0.94
SGN1P40561 NCP1YHR042W 2076 nt9.17□□□□□ -0.94
SGN1P40561 TRM5YHR070W 1500 nt9.16□□□□□ -0.94
SGN1P40561 WSC2YNL283C 1512 nt9.16□□□□□ -0.94
SGN1P40561 DDR2YOL052C-A 186 nt9.16□□□□□ -0.94
SGN1P40561 STB1YNL309W 1263 nt9.12□□□□□ -0.95
SGN1P40561 ATF2YGR177C 1608 nt9.12□□□□□ -0.95
SGN1P40561 SPC25YER018C 666 nt9.11□□□□□ -0.95
SGN1P40561 CRR1YLR213C 1269 nt9.11□□□□□ -0.95
SGN1P40561 GPI16YHR188C 1833 nt9.1□□□□□ -0.95
SGN1P40561 YDR524C-BYDR524C-B 201 nt9.09□□□□□ -0.95
SGN1P40561 PIB2YGL023C 1908 nt9.08□□□□□ -0.96
SGN1P40561 YDL086C-AYDL086C-A 435 nt9.08□□□□□ -0.96
SGN1P40561 YFR018CYFR018C 1092 nt9.07□□□□□ -0.96
SGN1P40561 CCT4YDL143W 1587 nt9.07□□□□□ -0.96
SGN1P40561 HEM12YDR047W 1089 nt9.06□□□□□ -0.96
SGN1P40561 LYS4YDR234W 2082 nt9.05□□□□□ -0.96
SGN1P40561 RRT5YFR032C 870 nt9.04□□□□□ -0.96
SGN1P40561 YLR415CYLR415C 339 nt9.03□□□□□ -0.96
SGN1P40561 SWC5YBR231C 912 nt9.03□□□□□ -0.96
SGN1P40561 ANP1YEL036C 1503 nt9.02□□□□□ -0.97
SGN1P40561 SNG1YGR197C 1644 nt9.02□□□□□ -0.97
SGN1P40561 FEN2YCR028C 1539 nt9.01□□□□□ -0.97
SGN1P40561 VPS60YDR486C 690 nt9.01□□□□□ -0.97
SGN1P40561 BDH1YAL060W 1149 nt9□□□□□ -0.97
SGN1P40561 PTK1YKL198C 1989 nt8.99□□□□□ -0.97
SGN1P40561 PEX25YPL112C 1185 nt8.97□□□□□ -0.97
SGN1P40561 MIC10YCL057C-A 294 nt8.97□□□□□ -0.97
SGN1P40561 YSP3YOR003W 1437 nt8.97□□□□□ -0.97
SGN1P40561 PAU16YKL224C 372 nt8.94□□□□□ -0.98
SGN1P40561 YIR016WYIR016W 798 nt8.93□□□□□ -0.98
SGN1P40561 BNA2YJR078W 1362 nt8.93□□□□□ -0.98
SGN1P40561 ALG3YBL082C 1377 nt8.93□□□□□ -0.98
SGN1P40561 YNL115CYNL115C 1935 nt8.93□□□□□ -0.98
SGN1P40561 YFL015W-AYFL015W-A 318 nt8.92□□□□□ -0.98
SGN1P40561 YFL066CYFL066C 1179 nt8.92□□□□□ -0.98
SGN1P40561 PRE6YOL038W 765 nt8.92□□□□□ -0.98
SGN1P40561 YHR056W-AYHR056W-A 435 nt8.9□□□□□ -0.98
SGN1P40561 YFL054CYFL054C 1941 nt8.9□□□□□ -0.99
SGN1P40561 RAX1YOR301W 1308 nt8.88□□□□□ -0.99
SGN1P40561 SPT8YLR055C 1809 nt8.87□□□□□ -0.99
SGN1P40561 VPS75YNL246W 795 nt8.85□□□□□ -0.99
SGN1P40561 TIM17YJL143W 477 nt8.84□□□□□ -0.99
SGN1P40561 MIC12YBR262C 321 nt8.82□□□□□ -1
SGN1P40561 GLK1YCL040W 1503 nt8.81□□□□□ -1
SGN1P40561 NAT4YMR069W 858 nt8.81□□□□□ -1
SGN1P40561 HHO1YPL127C 777 nt8.79□□□□□ -1
SGN1P40561 BSP1YPR171W 1731 nt8.79□□□□□ -1
SGN1P40561 XDJ1YLR090W 1380 nt8.78□□□□□ -1
SGN1P40561 PAU7YAR020C 168 nt8.78□□□□□ -1
SGN1P40561 YGR201CYGR201C 678 nt8.77□□□□□ -1.01
SGN1P40561 SHM2YLR058C 1410 nt8.76□□□□□ -1.01
SGN1P40561 GDH3YAL062W 1374 nt8.74□□□□□ -1.01
SGN1P40561 THI74YDR438W 1113 nt8.73□□□□□ -1.01
SGN1P40561 MIR1YJR077C 936 nt8.72□□□□□ -1.01
SGN1P40561 MSF1YPR047W 1410 nt8.71□□□□□ -1.02
SGN1P40561 SSN3YPL042C 1668 nt8.7□□□□□ -1.02
SGN1P40561 UME6YDR207C 2511 nt8.69□□□□□ -1.02
SGN1P40561 AVT6YER119C 1347 nt8.67□□□□□ -1.02
SGN1P40561 SWE1YJL187C 2460 nt8.67□□□□□ -1.02
SGN1P40561 GOR1YNL274C 1053 nt8.67□□□□□ -1.02
SGN1P40561 SGT2YOR007C 1041 nt8.66□□□□□ -1.02
SGN1P40561 CCA1YER168C 1641 nt8.65□□□□□ -1.02
SGN1P40561 NIT1YIL164C 600 nt8.65□□□□□ -1.02
SGN1P40561 UBA4YHR111W 1323 nt8.62□□□□□ -1.03
SGN1P40561 SHB17YKR043C 816 nt8.62□□□□□ -1.03
SGN1P40561 DAT1YML113W 747 nt8.62□□□□□ -1.03
SGN1P40561 BOR1YNL275W 1731 nt8.62□□□□□ -1.03
SGN1P40561 SBA1YKL117W 651 nt8.58□□□□□ -1.04
SGN1P40561 YSR3YKR053C 1215 nt8.58□□□□□ -1.04
SGN1P40561 AGP1YCL025C 1902 nt8.58□□□□□ -1.04
SGN1P40561 YCR102CYCR102C 1107 nt8.57□□□□□ -1.04
SGN1P40561 YGL034CYGL034C 366 nt8.56□□□□□ -1.04
SGN1P40561 DUS1YML080W 1272 nt8.56□□□□□ -1.04
SGN1P40561 YCR087WYCR087W 516 nt8.55□□□□□ -1.04
SGN1P40561 YDR010CYDR010C 333 nt8.55□□□□□ -1.04
SGN1P40561 YDR510C-AYDR510C-A 117 nt8.55□□□□□ -1.04
SGN1P40561 NME1NME1 340 nt8.54□□□□□ -1.04
SGN1P40561 RET2YFR051C 1641 nt8.54□□□□□ -1.04
SGN1P40561 Q0010Q0010 387 nt8.53□□□□□ -1.04
SGN1P40561 DUT1YBR252W 444 nt8.52□□□□□ -1.05
SGN1P40561 PHO89YBR296C 1725 nt8.51□□□□□ -1.05
SGN1P40561 XYL2YLR070C 1071 nt8.49□□□□□ -1.05
SGN1P40561 YCL074WYCL074W 927 nt8.47□□□□□ -1.05
SGN1P40561 MRP20YDR405W 792 nt8.47□□□□□ -1.05
SGN1P40561 STR3YGL184C 1398 nt8.45□□□□□ -1.06
SGN1P40561 NDI1YML120C 1542 nt8.44□□□□□ -1.06
SGN1P40561 NBP35YGL091C 987 nt8.44□□□□□ -1.06
SGN1P40561 RBG1YAL036C 1110 nt8.44□□□□□ -1.06
SGN1P40561 AIM45YPR004C 1035 nt8.44□□□□□ -1.06
SGN1P40561 AQY2YLL052C 450 nt8.43□□□□□ -1.06
SGN1P40561 GLR1YPL091W 1452 nt8.43□□□□□ -1.06
SGN1P40561 MCH5YOR306C 1566 nt8.41□□□□□ -1.06
SGN1P40561 TIR3YIL011W 810 nt8.41□□□□□ -1.06
SGN1P40561 MCM5YLR274W 2328 nt8.4□□□□□ -1.06
SGN1P40561 YHL019W-AYHL019W-A 594 nt8.4□□□□□ -1.06
SGN1P40561 FUR4YBR021W 1902 nt8.39□□□□□ -1.07
SGN1P40561 SFA1YDL168W 1161 nt8.39□□□□□ -1.07
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms