Protein–RNA interactions for Protein: P38789

SSF1, Ribosome biogenesis protein SSF1, yeastyeast

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSF1P38789 ATF2YGR177C 1608 nt13.2□□□□□ -0.3
SSF1P38789 YFL067WYFL067W 528 nt13.19□□□□□ -0.3
SSF1P38789 CRR1YLR213C 1269 nt13.17□□□□□ -0.3
SSF1P38789 STB1YNL309W 1263 nt13.17□□□□□ -0.3
SSF1P38789 PIB2YGL023C 1908 nt13.15□□□□□ -0.3
SSF1P38789 YDR524C-BYDR524C-B 201 nt13.13□□□□□ -0.31
SSF1P38789 SPC25YER018C 666 nt13.11□□□□□ -0.31
SSF1P38789 GPI16YHR188C 1833 nt13.09□□□□□ -0.31
SSF1P38789 YDL086C-AYDL086C-A 435 nt13.09□□□□□ -0.31
SSF1P38789 LYS4YDR234W 2082 nt13.09□□□□□ -0.31
SSF1P38789 CCT4YDL143W 1587 nt13.08□□□□□ -0.32
SSF1P38789 HEM12YDR047W 1089 nt13.08□□□□□ -0.32
SSF1P38789 YFR018CYFR018C 1092 nt13.05□□□□□ -0.32
SSF1P38789 SWC5YBR231C 912 nt13.05□□□□□ -0.32
SSF1P38789 SNG1YGR197C 1644 nt13.04□□□□□ -0.32
SSF1P38789 VPS60YDR486C 690 nt13.03□□□□□ -0.32
SSF1P38789 YLR415CYLR415C 339 nt13.02□□□□□ -0.33
SSF1P38789 MIC10YCL057C-A 294 nt13.02□□□□□ -0.33
SSF1P38789 BDH1YAL060W 1149 nt13.01□□□□□ -0.33
SSF1P38789 FEN2YCR028C 1539 nt13.01□□□□□ -0.33
SSF1P38789 ANP1YEL036C 1503 nt13.01□□□□□ -0.33
SSF1P38789 PTK1YKL198C 1989 nt13□□□□□ -0.33
SSF1P38789 RRT5YFR032C 870 nt13□□□□□ -0.33
SSF1P38789 PRE6YOL038W 765 nt12.98□□□□□ -0.33
SSF1P38789 PAU16YKL224C 372 nt12.95□□□□□ -0.34
SSF1P38789 PEX25YPL112C 1185 nt12.95□□□□□ -0.34
SSF1P38789 ALG3YBL082C 1377 nt12.94□□□□□ -0.34
SSF1P38789 YFL066CYFL066C 1179 nt12.94□□□□□ -0.34
SSF1P38789 YSP3YOR003W 1437 nt12.94□□□□□ -0.34
SSF1P38789 YNL115CYNL115C 1935 nt12.91□□□□□ -0.34
SSF1P38789 YFL015W-AYFL015W-A 318 nt12.89□□□□□ -0.35
SSF1P38789 YIR016WYIR016W 798 nt12.89□□□□□ -0.35
SSF1P38789 YFL054CYFL054C 1941 nt12.88□□□□□ -0.35
SSF1P38789 YHR056W-AYHR056W-A 435 nt12.88□□□□□ -0.35
SSF1P38789 BNA2YJR078W 1362 nt12.87□□□□□ -0.35
SSF1P38789 RAX1YOR301W 1308 nt12.81□□□□□ -0.36
SSF1P38789 SPT8YLR055C 1809 nt12.79□□□□□ -0.36
SSF1P38789 TIM17YJL143W 477 nt12.74□□□□□ -0.37
SSF1P38789 VPS75YNL246W 795 nt12.74□□□□□ -0.37
SSF1P38789 MIC12YBR262C 321 nt12.72□□□□□ -0.37
SSF1P38789 XDJ1YLR090W 1380 nt12.69□□□□□ -0.38
SSF1P38789 GLK1YCL040W 1503 nt12.69□□□□□ -0.38
SSF1P38789 NAT4YMR069W 858 nt12.68□□□□□ -0.38
SSF1P38789 HHO1YPL127C 777 nt12.68□□□□□ -0.38
SSF1P38789 SHM2YLR058C 1410 nt12.66□□□□□ -0.38
SSF1P38789 PAU7YAR020C 168 nt12.65□□□□□ -0.38
SSF1P38789 GDH3YAL062W 1374 nt12.62□□□□□ -0.39
SSF1P38789 YGR201CYGR201C 678 nt12.61□□□□□ -0.39
SSF1P38789 MIR1YJR077C 936 nt12.6□□□□□ -0.39
SSF1P38789 THI74YDR438W 1113 nt12.58□□□□□ -0.4
SSF1P38789 SWE1YJL187C 2460 nt12.56□□□□□ -0.4
SSF1P38789 MSF1YPR047W 1410 nt12.55□□□□□ -0.4
SSF1P38789 CCA1YER168C 1641 nt12.55□□□□□ -0.4
SSF1P38789 RPM1RPM1 483 nt12.54□□□□□ -0.4
SSF1P38789 SGT2YOR007C 1041 nt12.54□□□□□ -0.4
SSF1P38789 AVT6YER119C 1347 nt12.54□□□□□ -0.4
SSF1P38789 NIT1YIL164C 600 nt12.51□□□□□ -0.41
SSF1P38789 GOR1YNL274C 1053 nt12.5□□□□□ -0.41
SSF1P38789 SHB17YKR043C 816 nt12.46□□□□□ -0.41
SSF1P38789 DAT1YML113W 747 nt12.46□□□□□ -0.41
SSF1P38789 AGP1YCL025C 1902 nt12.46□□□□□ -0.42
SSF1P38789 SBA1YKL117W 651 nt12.44□□□□□ -0.42
SSF1P38789 UBA4YHR111W 1323 nt12.43□□□□□ -0.42
SSF1P38789 FRE6YLL051C 2139 nt12.43□□□□□ -0.42
SSF1P38789 DUS1YML080W 1272 nt12.4□□□□□ -0.42
SSF1P38789 DUT1YBR252W 444 nt12.4□□□□□ -0.42
SSF1P38789 NVJ2YPR091C 2313 nt12.39□□□□□ -0.43
SSF1P38789 YSR3YKR053C 1215 nt12.39□□□□□ -0.43
SSF1P38789 YDR010CYDR010C 333 nt12.36□□□□□ -0.43
SSF1P38789 YGL034CYGL034C 366 nt12.35□□□□□ -0.43
SSF1P38789 YCR102CYCR102C 1107 nt12.33□□□□□ -0.44
SSF1P38789 PHO89YBR296C 1725 nt12.31□□□□□ -0.44
SSF1P38789 RET2YFR051C 1641 nt12.29□□□□□ -0.44
SSF1P38789 XYL2YLR070C 1071 nt12.29□□□□□ -0.44
SSF1P38789 YCR087WYCR087W 516 nt12.26□□□□□ -0.45
SSF1P38789 AQY2YLL052C 450 nt12.24□□□□□ -0.45
SSF1P38789 YCL074WYCL074W 927 nt12.22□□□□□ -0.45
SSF1P38789 RBG1YAL036C 1110 nt12.22□□□□□ -0.45
SSF1P38789 PAC11YDR488C 1602 nt12.22□□□□□ -0.45
SSF1P38789 YJL225CYJL225C 5277 nt12.21□□□□□ -0.45
SSF1P38789 STR3YGL184C 1398 nt12.2□□□□□ -0.46
SSF1P38789 MRP20YDR405W 792 nt12.19□□□□□ -0.46
SSF1P38789 NDI1YML120C 1542 nt12.19□□□□□ -0.46
SSF1P38789 YGR139WYGR139W 339 nt12.18□□□□□ -0.46
SSF1P38789 NBP35YGL091C 987 nt12.17□□□□□ -0.46
SSF1P38789 AIM45YPR004C 1035 nt12.17□□□□□ -0.46
SSF1P38789 YHL019W-AYHL019W-A 594 nt12.16□□□□□ -0.46
SSF1P38789 FUR4YBR021W 1902 nt12.15□□□□□ -0.46
SSF1P38789 SFA1YDL168W 1161 nt12.15□□□□□ -0.46
SSF1P38789 RDN18-1RDN18-1 1800 nt12.15□□□□□ -0.46
SSF1P38789 RDN18-2RDN18-2 1800 nt12.15□□□□□ -0.46
SSF1P38789 GLR1YPL091W 1452 nt12.14□□□□□ -0.47
SSF1P38789 COQ2YNR041C 1119 nt12.13□□□□□ -0.47
SSF1P38789 TIR3YIL011W 810 nt12.11□□□□□ -0.47
SSF1P38789 YMR244WYMR244W 1068 nt12.09□□□□□ -0.47
SSF1P38789 SHH4YLR164W 507 nt12.08□□□□□ -0.48
SSF1P38789 TOM6YOR045W 186 nt12.02□□□□□ -0.49
SSF1P38789 RPL4BYDR012W 1089 nt12□□□□□ -0.49
SSF1P38789 RPL4AYBR031W 1089 nt12□□□□□ -0.49
SSF1P38789 CLB6YGR109C 1143 nt11.99□□□□□ -0.49
Retrieved 100 of 7,029 protein–RNA pairs in 630.9 ms