Protein–RNA interactions for Protein: P38428

CUE1, Coupling of ubiquitin conjugation to ER degradation protein 1, yeastyeast

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUE1P38428 GAL1YBR020W 1587 nt9.17□□□□□ -0.94
CUE1P38428 GLK1YCL040W 1503 nt9.15□□□□□ -0.94
CUE1P38428 YLR235CYLR235C 399 nt9.15□□□□□ -0.94
CUE1P38428 RTG1YOL067C 534 nt9.15□□□□□ -0.94
CUE1P38428 MIC10YCL057C-A 294 nt9.15□□□□□ -0.94
CUE1P38428 SWE1YJL187C 2460 nt9.14□□□□□ -0.95
CUE1P38428 TRM5YHR070W 1500 nt9.14□□□□□ -0.95
CUE1P38428 YHR056W-AYHR056W-A 435 nt9.13□□□□□ -0.95
CUE1P38428 SNG1YGR197C 1644 nt9.13□□□□□ -0.95
CUE1P38428 YFL067WYFL067W 528 nt9.11□□□□□ -0.95
CUE1P38428 HEM12YDR047W 1089 nt9.1□□□□□ -0.95
CUE1P38428 TIM23YNR017W 669 nt9.1□□□□□ -0.95
CUE1P38428 AQY1YPR192W 918 nt9.09□□□□□ -0.95
CUE1P38428 NAR1YNL240C 1476 nt9.08□□□□□ -0.96
CUE1P38428 YKL030WYKL030W 606 nt9.07□□□□□ -0.96
CUE1P38428 WSC2YNL283C 1512 nt9.06□□□□□ -0.96
CUE1P38428 HUA1YGR268C 597 nt9.06□□□□□ -0.96
CUE1P38428 ANP1YEL036C 1503 nt9.05□□□□□ -0.96
CUE1P38428 YDL086C-AYDL086C-A 435 nt9.05□□□□□ -0.96
CUE1P38428 YLR179CYLR179C 606 nt9.05□□□□□ -0.96
CUE1P38428 DDR2YOL052C-A 186 nt9.05□□□□□ -0.96
CUE1P38428 SPC25YER018C 666 nt9.04□□□□□ -0.96
CUE1P38428 AHT1YHR093W 549 nt9.04□□□□□ -0.96
CUE1P38428 STB1YNL309W 1263 nt9.03□□□□□ -0.96
CUE1P38428 YDR524C-BYDR524C-B 201 nt9□□□□□ -0.97
CUE1P38428 AAC1YMR056C 930 nt9□□□□□ -0.97
CUE1P38428 RAX1YOR301W 1308 nt8.99□□□□□ -0.97
CUE1P38428 FEN2YCR028C 1539 nt8.96□□□□□ -0.97
CUE1P38428 MIC12YBR262C 321 nt8.96□□□□□ -0.98
CUE1P38428 GPI16YHR188C 1833 nt8.96□□□□□ -0.98
CUE1P38428 CCA1YER168C 1641 nt8.95□□□□□ -0.98
CUE1P38428 VPS60YDR486C 690 nt8.95□□□□□ -0.98
CUE1P38428 UBX6YJL048C 1191 nt8.95□□□□□ -0.98
CUE1P38428 ALG3YBL082C 1377 nt8.94□□□□□ -0.98
CUE1P38428 CCT4YDL143W 1587 nt8.94□□□□□ -0.98
CUE1P38428 YPR064WYPR064W 420 nt8.93□□□□□ -0.98
CUE1P38428 FUR4YBR021W 1902 nt8.93□□□□□ -0.98
CUE1P38428 PRP4YPR178W 1398 nt8.92□□□□□ -0.98
CUE1P38428 TAD3YLR316C 969 nt8.91□□□□□ -0.98
CUE1P38428 YIR016WYIR016W 798 nt8.9□□□□□ -0.98
CUE1P38428 CYT2YKL087C 675 nt8.89□□□□□ -0.99
CUE1P38428 CMP2YML057W 1815 nt8.88□□□□□ -0.99
CUE1P38428 AGP1YCL025C 1902 nt8.87□□□□□ -0.99
CUE1P38428 BNA2YJR078W 1362 nt8.86□□□□□ -0.99
CUE1P38428 DPS1YLL018C 1674 nt8.85□□□□□ -0.99
CUE1P38428 BDH1YAL060W 1149 nt8.85□□□□□ -0.99
CUE1P38428 YDR094WYDR094W 336 nt8.84□□□□□ -0.99
CUE1P38428 PBP1YGR178C 2169 nt8.83□□□□□ -1
CUE1P38428 tL(GAG)GtL(GAG)G 82 nt8.83□□□□□ -1
CUE1P38428 BMT6YLR063W 1098 nt8.83□□□□□ -1
CUE1P38428 SWC5YBR231C 912 nt8.83□□□□□ -1
CUE1P38428 BIO5YNR056C 1686 nt8.8□□□□□ -1
CUE1P38428 HSL7YBR133C 2484 nt8.79□□□□□ -1
CUE1P38428 XDJ1YLR090W 1380 nt8.78□□□□□ -1
CUE1P38428 YGR201CYGR201C 678 nt8.77□□□□□ -1.01
CUE1P38428 HHO1YPL127C 777 nt8.77□□□□□ -1.01
CUE1P38428 YSP3YOR003W 1437 nt8.77□□□□□ -1.01
CUE1P38428 YLR415CYLR415C 339 nt8.74□□□□□ -1.01
CUE1P38428 DUT1YBR252W 444 nt8.72□□□□□ -1.01
CUE1P38428 SNF1YDR477W 1902 nt8.7□□□□□ -1.02
CUE1P38428 YCL074WYCL074W 927 nt8.67□□□□□ -1.02
CUE1P38428 YKR005CYKR005C 1578 nt8.67□□□□□ -1.02
CUE1P38428 SHM2YLR058C 1410 nt8.67□□□□□ -1.02
CUE1P38428 NDI1YML120C 1542 nt8.67□□□□□ -1.02
CUE1P38428 PEX25YPL112C 1185 nt8.66□□□□□ -1.02
CUE1P38428 RDN25-1RDN25-1 3396 nt8.66□□□□□ -1.02
CUE1P38428 RDN25-2RDN25-2 3396 nt8.66□□□□□ -1.02
CUE1P38428 GDH3YAL062W 1374 nt8.65□□□□□ -1.02
CUE1P38428 RDN18-1RDN18-1 1800 nt8.65□□□□□ -1.02
CUE1P38428 RDN18-2RDN18-2 1800 nt8.65□□□□□ -1.02
CUE1P38428 YFR018CYFR018C 1092 nt8.64□□□□□ -1.03
CUE1P38428 RRT5YFR032C 870 nt8.64□□□□□ -1.03
CUE1P38428 IRC24YIR036C 792 nt8.64□□□□□ -1.03
CUE1P38428 DUS1YML080W 1272 nt8.64□□□□□ -1.03
CUE1P38428 YNL115CYNL115C 1935 nt8.64□□□□□ -1.03
CUE1P38428 STR3YGL184C 1398 nt8.63□□□□□ -1.03
CUE1P38428 YFL015W-AYFL015W-A 318 nt8.63□□□□□ -1.03
CUE1P38428 NIT1YIL164C 600 nt8.63□□□□□ -1.03
CUE1P38428 AVT6YER119C 1347 nt8.62□□□□□ -1.03
CUE1P38428 PAU16YKL224C 372 nt8.62□□□□□ -1.03
CUE1P38428 FRE6YLL051C 2139 nt8.62□□□□□ -1.03
CUE1P38428 TIM17YJL143W 477 nt8.61□□□□□ -1.03
CUE1P38428 HEL2YDR266C 1920 nt8.6□□□□□ -1.03
CUE1P38428 YFL066CYFL066C 1179 nt8.6□□□□□ -1.03
CUE1P38428 PRE6YOL038W 765 nt8.6□□□□□ -1.03
CUE1P38428 DAT1YML113W 747 nt8.59□□□□□ -1.03
CUE1P38428 GOR1YNL274C 1053 nt8.58□□□□□ -1.04
CUE1P38428 YGR259CYGR259C 441 nt8.55□□□□□ -1.04
CUE1P38428 VPS75YNL246W 795 nt8.55□□□□□ -1.04
CUE1P38428 SGT2YOR007C 1041 nt8.55□□□□□ -1.04
CUE1P38428 YAT1YAR035W 2064 nt8.52□□□□□ -1.05
CUE1P38428 NBP35YGL091C 987 nt8.49□□□□□ -1.05
CUE1P38428 AQY2YLL052C 450 nt8.49□□□□□ -1.05
CUE1P38428 SPT20YOL148C 1815 nt8.49□□□□□ -1.05
CUE1P38428 RTN2YDL204W 1182 nt8.47□□□□□ -1.05
CUE1P38428 YCR102CYCR102C 1107 nt8.46□□□□□ -1.06
CUE1P38428 NAT4YMR069W 858 nt8.43□□□□□ -1.06
CUE1P38428 ARP6YLR085C 1317 nt8.41□□□□□ -1.06
CUE1P38428 YDR010CYDR010C 333 nt8.4□□□□□ -1.06
CUE1P38428 MIR1YJR077C 936 nt8.39□□□□□ -1.07
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms