Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 GLK1YCL040W 1503 nt10.56□□□□□ -0.72
TDP1P38319 FUR4YBR021W 1902 nt10.54□□□□□ -0.72
TDP1P38319 MCH5YOR306C 1566 nt10.54□□□□□ -0.72
TDP1P38319 YDL086C-AYDL086C-A 435 nt10.5□□□□□ -0.73
TDP1P38319 DDR2YOL052C-A 186 nt10.5□□□□□ -0.73
TDP1P38319 ANP1YEL036C 1503 nt10.49□□□□□ -0.73
TDP1P38319 AQY1YPR192W 918 nt10.45□□□□□ -0.74
TDP1P38319 ALG12YNR030W 1656 nt10.44□□□□□ -0.74
TDP1P38319 MIC12YBR262C 321 nt10.41□□□□□ -0.74
TDP1P38319 SPC25YER018C 666 nt10.4□□□□□ -0.74
TDP1P38319 PTH1YHR189W 573 nt10.4□□□□□ -0.74
TDP1P38319 STB1YNL309W 1263 nt10.4□□□□□ -0.74
TDP1P38319 SPP1YPL138C 1062 nt10.4□□□□□ -0.74
TDP1P38319 YDR524C-BYDR524C-B 201 nt10.38□□□□□ -0.75
TDP1P38319 AGP1YCL025C 1902 nt10.38□□□□□ -0.75
TDP1P38319 YEL076C-AYEL076C-A 651 nt10.37□□□□□ -0.75
TDP1P38319 YEL076CYEL076C 651 nt10.37□□□□□ -0.75
TDP1P38319 YLR235CYLR235C 399 nt10.37□□□□□ -0.75
TDP1P38319 YLR464WYLR464W 651 nt10.37□□□□□ -0.75
TDP1P38319 TIM23YNR017W 669 nt10.37□□□□□ -0.75
TDP1P38319 BNA2YJR078W 1362 nt10.37□□□□□ -0.75
TDP1P38319 PRP4YPR178W 1398 nt10.37□□□□□ -0.75
TDP1P38319 FEN2YCR028C 1539 nt10.36□□□□□ -0.75
TDP1P38319 YLR179CYLR179C 606 nt10.34□□□□□ -0.75
TDP1P38319 DPS1YLL018C 1674 nt10.33□□□□□ -0.76
TDP1P38319 MRPL8YJL063C 717 nt10.32□□□□□ -0.76
TDP1P38319 GPI16YHR188C 1833 nt10.32□□□□□ -0.76
TDP1P38319 WSC2YNL283C 1512 nt10.31□□□□□ -0.76
TDP1P38319 AHT1YHR093W 549 nt10.3□□□□□ -0.76
TDP1P38319 VPS60YDR486C 690 nt10.29□□□□□ -0.76
TDP1P38319 YIR016WYIR016W 798 nt10.29□□□□□ -0.76
TDP1P38319 AAC1YMR056C 930 nt10.29□□□□□ -0.76
TDP1P38319 CCT4YDL143W 1587 nt10.27□□□□□ -0.76
TDP1P38319 YKR005CYKR005C 1578 nt10.27□□□□□ -0.76
TDP1P38319 ALG3YBL082C 1377 nt10.26□□□□□ -0.77
TDP1P38319 HHO1YPL127C 777 nt10.25□□□□□ -0.77
TDP1P38319 YCL074WYCL074W 927 nt10.24□□□□□ -0.77
TDP1P38319 YKL030WYKL030W 606 nt10.23□□□□□ -0.77
TDP1P38319 RTG1YOL067C 534 nt10.23□□□□□ -0.77
TDP1P38319 XDJ1YLR090W 1380 nt10.23□□□□□ -0.77
TDP1P38319 DUS1YML080W 1272 nt10.22□□□□□ -0.77
TDP1P38319 SNF1YDR477W 1902 nt10.22□□□□□ -0.77
TDP1P38319 ADO1YJR105W 1023 nt10.2□□□□□ -0.78
TDP1P38319 YGR201CYGR201C 678 nt10.19□□□□□ -0.78
TDP1P38319 BMT6YLR063W 1098 nt10.19□□□□□ -0.78
TDP1P38319 BIO5YNR056C 1686 nt10.18□□□□□ -0.78
TDP1P38319 YGR259CYGR259C 441 nt10.17□□□□□ -0.78
TDP1P38319 YPR064WYPR064W 420 nt10.17□□□□□ -0.78
TDP1P38319 SWC5YBR231C 912 nt10.17□□□□□ -0.78
TDP1P38319 RDN18-1RDN18-1 1800 nt10.16□□□□□ -0.78
TDP1P38319 RDN18-2RDN18-2 1800 nt10.16□□□□□ -0.78
TDP1P38319 DUT1YBR252W 444 nt10.15□□□□□ -0.78
TDP1P38319 NAR1YNL240C 1476 nt10.13□□□□□ -0.79
TDP1P38319 STR3YGL184C 1398 nt10.13□□□□□ -0.79
TDP1P38319 TAD3YLR316C 969 nt10.12□□□□□ -0.79
TDP1P38319 IRC24YIR036C 792 nt10.11□□□□□ -0.79
TDP1P38319 PBP1YGR178C 2169 nt10.1□□□□□ -0.79
TDP1P38319 UBX6YJL048C 1191 nt10.08□□□□□ -0.8
TDP1P38319 BDH1YAL060W 1149 nt10.05□□□□□ -0.8
TDP1P38319 AVT6YER119C 1347 nt10.03□□□□□ -0.8
TDP1P38319 GDH3YAL062W 1374 nt10.02□□□□□ -0.8
TDP1P38319 HUA1YGR268C 597 nt10.02□□□□□ -0.81
TDP1P38319 CYT2YKL087C 675 nt10□□□□□ -0.81
TDP1P38319 GOR1YNL274C 1053 nt10□□□□□ -0.81
TDP1P38319 AQY2YLL052C 450 nt9.98□□□□□ -0.81
TDP1P38319 YLR415CYLR415C 339 nt9.96□□□□□ -0.82
TDP1P38319 SHM2YLR058C 1410 nt9.96□□□□□ -0.82
TDP1P38319 RTN2YDL204W 1182 nt9.95□□□□□ -0.82
TDP1P38319 tL(GAG)GtL(GAG)G 82 nt9.93□□□□□ -0.82
TDP1P38319 YSP3YOR003W 1437 nt9.91□□□□□ -0.82
TDP1P38319 DAT1YML113W 747 nt9.9□□□□□ -0.82
TDP1P38319 NIT1YIL164C 600 nt9.89□□□□□ -0.83
TDP1P38319 YDR094WYDR094W 336 nt9.88□□□□□ -0.83
TDP1P38319 TIM17YJL143W 477 nt9.87□□□□□ -0.83
TDP1P38319 HSL7YBR133C 2484 nt9.87□□□□□ -0.83
TDP1P38319 NBP35YGL091C 987 nt9.84□□□□□ -0.83
TDP1P38319 PLB1YMR008C 1995 nt9.81□□□□□ -0.84
TDP1P38319 SGT2YOR007C 1041 nt9.8□□□□□ -0.84
TDP1P38319 ARP6YLR085C 1317 nt9.8□□□□□ -0.84
TDP1P38319 YAT1YAR035W 2064 nt9.79□□□□□ -0.84
TDP1P38319 YCR102CYCR102C 1107 nt9.79□□□□□ -0.84
TDP1P38319 RPM1RPM1 483 nt9.78□□□□□ -0.84
TDP1P38319 YNL115CYNL115C 1935 nt9.78□□□□□ -0.84
TDP1P38319 YFL015W-AYFL015W-A 318 nt9.74□□□□□ -0.85
TDP1P38319 PEX25YPL112C 1185 nt9.72□□□□□ -0.85
TDP1P38319 CMP2YML057W 1815 nt9.72□□□□□ -0.85
TDP1P38319 PRM5YIL117C 957 nt9.71□□□□□ -0.86
TDP1P38319 HIF1YLL022C 1158 nt9.71□□□□□ -0.86
TDP1P38319 RDN25-1RDN25-1 3396 nt9.7□□□□□ -0.86
TDP1P38319 RDN25-2RDN25-2 3396 nt9.7□□□□□ -0.86
TDP1P38319 VPS75YNL246W 795 nt9.67□□□□□ -0.86
TDP1P38319 ALD4YOR374W 1560 nt9.67□□□□□ -0.86
TDP1P38319 YFL066CYFL066C 1179 nt9.66□□□□□ -0.86
TDP1P38319 NDI1YML120C 1542 nt9.66□□□□□ -0.86
TDP1P38319 HEL2YDR266C 1920 nt9.65□□□□□ -0.86
TDP1P38319 UTR1YJR049C 1593 nt9.64□□□□□ -0.87
TDP1P38319 LSC2YGR244C 1284 nt9.62□□□□□ -0.87
TDP1P38319 TIR3YIL011W 810 nt9.62□□□□□ -0.87
TDP1P38319 PAU16YKL224C 372 nt9.62□□□□□ -0.87
TDP1P38319 SHH4YLR164W 507 nt9.62□□□□□ -0.87
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms