Protein–RNA interactions for Protein: P36534

MRPL40, 54S ribosomal protein L40, mitochondrial, yeastyeast

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MRPL40P36534 TRM5YHR070W 1500 nt11.09□□□□□ -0.63
MRPL40P36534 YFL067WYFL067W 528 nt11.06□□□□□ -0.64
MRPL40P36534 RRT5YFR032C 870 nt11.05□□□□□ -0.64
MRPL40P36534 DDR2YOL052C-A 186 nt11.05□□□□□ -0.64
MRPL40P36534 SPC25YER018C 666 nt11.04□□□□□ -0.64
MRPL40P36534 BOP3YNL042W 1191 nt11.04□□□□□ -0.64
MRPL40P36534 STB1YNL309W 1263 nt11.04□□□□□ -0.64
MRPL40P36534 ATF2YGR177C 1608 nt11.03□□□□□ -0.64
MRPL40P36534 CRR1YLR213C 1269 nt11.03□□□□□ -0.64
MRPL40P36534 NCP1YHR042W 2076 nt11.03□□□□□ -0.64
MRPL40P36534 PAU16YKL224C 372 nt11.02□□□□□ -0.65
MRPL40P36534 GPI16YHR188C 1833 nt11.01□□□□□ -0.65
MRPL40P36534 YDR524C-BYDR524C-B 201 nt11□□□□□ -0.65
MRPL40P36534 CCT4YDL143W 1587 nt10.99□□□□□ -0.65
MRPL40P36534 RTF1YGL244W 1677 nt10.99□□□□□ -0.65
MRPL40P36534 YDL086C-AYDL086C-A 435 nt10.98□□□□□ -0.65
MRPL40P36534 YLR415CYLR415C 339 nt10.97□□□□□ -0.65
MRPL40P36534 BDH1YAL060W 1149 nt10.96□□□□□ -0.65
MRPL40P36534 PRE6YOL038W 765 nt10.95□□□□□ -0.66
MRPL40P36534 PEX25YPL112C 1185 nt10.95□□□□□ -0.66
MRPL40P36534 SWC5YBR231C 912 nt10.95□□□□□ -0.66
MRPL40P36534 YSP3YOR003W 1437 nt10.93□□□□□ -0.66
MRPL40P36534 HEM12YDR047W 1089 nt10.93□□□□□ -0.66
MRPL40P36534 ANP1YEL036C 1503 nt10.93□□□□□ -0.66
MRPL40P36534 VPS60YDR486C 690 nt10.92□□□□□ -0.66
MRPL40P36534 LYS4YDR234W 2082 nt10.91□□□□□ -0.66
MRPL40P36534 FEN2YCR028C 1539 nt10.9□□□□□ -0.66
MRPL40P36534 PIB2YGL023C 1908 nt10.9□□□□□ -0.66
MRPL40P36534 SNG1YGR197C 1644 nt10.9□□□□□ -0.66
MRPL40P36534 YFL066CYFL066C 1179 nt10.87□□□□□ -0.67
MRPL40P36534 RPM1RPM1 483 nt10.87□□□□□ -0.67
MRPL40P36534 YNL115CYNL115C 1935 nt10.87□□□□□ -0.67
MRPL40P36534 BOR1YNL275W 1731 nt10.85□□□□□ -0.67
MRPL40P36534 MIC10YCL057C-A 294 nt10.85□□□□□ -0.67
MRPL40P36534 ALG3YBL082C 1377 nt10.85□□□□□ -0.67
MRPL40P36534 SBA1YKL117W 651 nt10.83□□□□□ -0.68
MRPL40P36534 RDN37-1RDN37-1 5354 nt10.83□□□□□ -0.68
MRPL40P36534 RDN37-2RDN37-2 5354 nt10.83□□□□□ -0.68
MRPL40P36534 MCH5YOR306C 1566 nt10.82□□□□□ -0.68
MRPL40P36534 YIR016WYIR016W 798 nt10.79□□□□□ -0.68
MRPL40P36534 VPS75YNL246W 795 nt10.78□□□□□ -0.68
MRPL40P36534 SPT8YLR055C 1809 nt10.78□□□□□ -0.68
MRPL40P36534 PTK1YKL198C 1989 nt10.77□□□□□ -0.68
MRPL40P36534 NAT4YMR069W 858 nt10.77□□□□□ -0.69
MRPL40P36534 YHR056W-AYHR056W-A 435 nt10.76□□□□□ -0.69
MRPL40P36534 GLK1YCL040W 1503 nt10.74□□□□□ -0.69
MRPL40P36534 BNA2YJR078W 1362 nt10.74□□□□□ -0.69
MRPL40P36534 TIM17YJL143W 477 nt10.72□□□□□ -0.69
MRPL40P36534 RAX1YOR301W 1308 nt10.69□□□□□ -0.7
MRPL40P36534 MIC12YBR262C 321 nt10.68□□□□□ -0.7
MRPL40P36534 MIR1YJR077C 936 nt10.67□□□□□ -0.7
MRPL40P36534 YFL054CYFL054C 1941 nt10.66□□□□□ -0.7
MRPL40P36534 THI74YDR438W 1113 nt10.64□□□□□ -0.71
MRPL40P36534 MSF1YPR047W 1410 nt10.64□□□□□ -0.71
MRPL40P36534 XDJ1YLR090W 1380 nt10.64□□□□□ -0.71
MRPL40P36534 PAU7YAR020C 168 nt10.63□□□□□ -0.71
MRPL40P36534 SHM2YLR058C 1410 nt10.62□□□□□ -0.71
MRPL40P36534 YGR201CYGR201C 678 nt10.6□□□□□ -0.71
MRPL40P36534 HHO1YPL127C 777 nt10.58□□□□□ -0.72
MRPL40P36534 GDH3YAL062W 1374 nt10.56□□□□□ -0.72
MRPL40P36534 NIT1YIL164C 600 nt10.52□□□□□ -0.73
MRPL40P36534 DAT1YML113W 747 nt10.52□□□□□ -0.73
MRPL40P36534 SGT2YOR007C 1041 nt10.52□□□□□ -0.73
MRPL40P36534 SHB17YKR043C 816 nt10.5□□□□□ -0.73
MRPL40P36534 UBA4YHR111W 1323 nt10.5□□□□□ -0.73
MRPL40P36534 AVT6YER119C 1347 nt10.47□□□□□ -0.73
MRPL40P36534 YGL034CYGL034C 366 nt10.44□□□□□ -0.74
MRPL40P36534 GOR1YNL274C 1053 nt10.44□□□□□ -0.74
MRPL40P36534 CCA1YER168C 1641 nt10.44□□□□□ -0.74
MRPL40P36534 YDR010CYDR010C 333 nt10.43□□□□□ -0.74
MRPL40P36534 YSR3YKR053C 1215 nt10.43□□□□□ -0.74
MRPL40P36534 SWE1YJL187C 2460 nt10.43□□□□□ -0.74
MRPL40P36534 ALG12YNR030W 1656 nt10.41□□□□□ -0.74
MRPL40P36534 YMR244WYMR244W 1068 nt10.39□□□□□ -0.75
MRPL40P36534 RET2YFR051C 1641 nt10.39□□□□□ -0.75
MRPL40P36534 GLR1YPL091W 1452 nt10.38□□□□□ -0.75
MRPL40P36534 YCR087WYCR087W 516 nt10.38□□□□□ -0.75
MRPL40P36534 AGP1YCL025C 1902 nt10.37□□□□□ -0.75
MRPL40P36534 PHO89YBR296C 1725 nt10.36□□□□□ -0.75
MRPL40P36534 YCR102CYCR102C 1107 nt10.35□□□□□ -0.75
MRPL40P36534 XYL2YLR070C 1071 nt10.34□□□□□ -0.75
MRPL40P36534 NDI1YML120C 1542 nt10.31□□□□□ -0.76
MRPL40P36534 DUT1YBR252W 444 nt10.3□□□□□ -0.76
MRPL40P36534 RBG1YAL036C 1110 nt10.28□□□□□ -0.76
MRPL40P36534 AIM45YPR004C 1035 nt10.28□□□□□ -0.76
MRPL40P36534 DUS1YML080W 1272 nt10.27□□□□□ -0.77
MRPL40P36534 MRP20YDR405W 792 nt10.26□□□□□ -0.77
MRPL40P36534 RBG2YGR173W 1107 nt10.23□□□□□ -0.77
MRPL40P36534 SFA1YDL168W 1161 nt10.21□□□□□ -0.77
MRPL40P36534 COQ2YNR041C 1119 nt10.21□□□□□ -0.77
MRPL40P36534 YCL074WYCL074W 927 nt10.2□□□□□ -0.78
MRPL40P36534 NBP35YGL091C 987 nt10.2□□□□□ -0.78
MRPL40P36534 YHL019W-AYHL019W-A 594 nt10.19□□□□□ -0.78
MRPL40P36534 TIR3YIL011W 810 nt10.19□□□□□ -0.78
MRPL40P36534 STR3YGL184C 1398 nt10.17□□□□□ -0.78
MRPL40P36534 AQY2YLL052C 450 nt10.17□□□□□ -0.78
MRPL40P36534 RPL4BYDR012W 1089 nt10.14□□□□□ -0.79
MRPL40P36534 YMR226CYMR226C 804 nt10.14□□□□□ -0.79
MRPL40P36534 RPL4AYBR031W 1089 nt10.14□□□□□ -0.79
MRPL40P36534 CLB6YGR109C 1143 nt10.12□□□□□ -0.79
Retrieved 100 of 7,029 protein–RNA pairs in 22.7 ms