Protein–RNA interactions for Protein: P35428

Hes1, Transcription factor HES-1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes1P35428 Mipep-204ENSMUST00000225043 1548 ntBASIC21.26■□□□□ 0.99
Hes1P35428 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.24■□□□□ 0.99
Hes1P35428 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.23■□□□□ 0.99
Hes1P35428 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Hes1P35428 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Hes1P35428 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hes1P35428 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.21■□□□□ 0.99
Hes1P35428 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.19■□□□□ 0.98
Hes1P35428 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hes1P35428 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Hes1P35428 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hes1P35428 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hes1P35428 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Hes1P35428 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hes1P35428 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hes1P35428 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Hes1P35428 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hes1P35428 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hes1P35428 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hes1P35428 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Hes1P35428 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Hes1P35428 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.03■□□□□ 0.96
Hes1P35428 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hes1P35428 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.03■□□□□ 0.96
Hes1P35428 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hes1P35428 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hes1P35428 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hes1P35428 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hes1P35428 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hes1P35428 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hes1P35428 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.99■□□□□ 0.95
Hes1P35428 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Hes1P35428 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hes1P35428 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hes1P35428 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hes1P35428 Gm24804-201ENSMUST00000174982 85 ntBASIC20.97■□□□□ 0.95
Hes1P35428 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hes1P35428 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hes1P35428 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hes1P35428 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hes1P35428 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Hes1P35428 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hes1P35428 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hes1P35428 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hes1P35428 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.87■□□□□ 0.93
Hes1P35428 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hes1P35428 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Hes1P35428 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hes1P35428 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hes1P35428 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hes1P35428 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hes1P35428 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hes1P35428 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Hes1P35428 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hes1P35428 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hes1P35428 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hes1P35428 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hes1P35428 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hes1P35428 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hes1P35428 Peli2-204ENSMUST00000226513 1320 ntBASIC20.77■□□□□ 0.91
Hes1P35428 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hes1P35428 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hes1P35428 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.76■□□□□ 0.91
Hes1P35428 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hes1P35428 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hes1P35428 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hes1P35428 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.74■□□□□ 0.91
Hes1P35428 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hes1P35428 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hes1P35428 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hes1P35428 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.73■□□□□ 0.91
Hes1P35428 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Hes1P35428 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Hes1P35428 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hes1P35428 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hes1P35428 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.71■□□□□ 0.91
Hes1P35428 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hes1P35428 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hes1P35428 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hes1P35428 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.69■□□□□ 0.9
Hes1P35428 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hes1P35428 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Hes1P35428 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hes1P35428 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Hes1P35428 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.66■□□□□ 0.9
Hes1P35428 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hes1P35428 Gm16148-201ENSMUST00000119653 893 ntBASIC20.65■□□□□ 0.9
Hes1P35428 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.64■□□□□ 0.9
Hes1P35428 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Hes1P35428 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hes1P35428 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hes1P35428 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hes1P35428 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hes1P35428 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hes1P35428 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hes1P35428 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hes1P35428 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hes1P35428 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Hes1P35428 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hes1P35428 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms